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Stains Chapter


Reviewer: Nat Pernick, M.D. (see Reviewers page)
Revised: 4 May 2013
Copyright: (c) 2002-2012, PathologyOutlines.com, Inc.

See also CD Markers chapter

Table of Contents - Stains

General: IHC basics    IHC procedure    common panels    enzyme cytochemistry

3 beta    7 AAD    11A1    14-3-3sigma    15-PGDH    45M1

A:  A beta 42    abl    acid fast acid phosphatase    ACSM1    acridine orange    actin-general    actin-alpha cardiac    actin-alpha smooth muscle,  actin-muscle specific    AE1-AE3 (cytokeratin)    AF-4    albumin    alcian blue    ALK    alkaline phosphatase    ALL1    alpha-1-antichymotrypsin    alpha-1-antitrypsin    alpha-fetoprotein    alpha-lactalbumin    AMACR    AML1    androgen receptor    APC    API2-MALT1    Apolipoprotein D    argentaffin    argyrophilic    asbestos    ATM    auramine-rhodamine


B:  B72.3    bcl1    bcl2    bcl6    bclXl    bcr-abl    Beclin1    BerEP4    beta-2-microglobulin    beta-catenin    BG7    BG8    Bielschovsky    biotin    blood group antigens    BMP    BOB.1    brachyury    BRAF    BRCA1    BRCA2

C: c-kit    c-MET    c-myc    CA125    cadherins    calcium    caldesmon    calponin    calretinin    CAM5.2    carbonic anhydrase IX    caspases    cathepsin B    CCR1    CCR2    CCR3    CCR4    CCR5    CCR6    CCR7    CCR8    CDC2    CDX2    CEA    ceramide    chaperones    chloroacetate esterase    chromaffin    chromogranin    claudins    claudin1    claudin6    claudin7    claudin18    clusterin    CMV    collagen    collagen II    collagen XVII    Congo Red    CXCR2    CXCR3    CXCR5    cyclins    Cyclin D1    cyclooxygenase 2

Cytokeratins: general    CK1    CK2    CK3    CK4    CK5    CK6    CK7    CK8    CK9    CK10    CK11    CK12    CK13    CK14    CK15    CK16    CK17    CK18    CK19    CK20    CK21    CK22    CK23    CK24    34betaE12    35betaH11    AE1, AE3    AE1-AE3    CAM5.2    KL-1    MNF116    OSCAR

DD2-40    DBA-44    DCC    deltaNp63    desmogleins    desmin    DOG1    DOPA reaction    DPC4    dynactin 1

EE1AF    E2A    E-cadherin    EBER1    EGFR    eIF-4F    elastic fibers    elongin    EMA    endothelin-1    EpCAM    Epstein Barr virus (EBV)    erbB2    ERCC1    ERG    estrogen receptor    ets1    ETV1    ETV6-NTRK3    EWS

FFactor VIII    Factor XIIIa    Fas/CD95    Fas ligand/CD178    fascin    ferritin    FGFR3    FLI-1    FLT3    FMC7    Fontana-Masson    FOXA1

G:  galectin3    GATA3    GCDFP-15    GFAP    Giemsa    GLUT1    GLUT4    glycophorin A    glycosoaminoglycans    glypican 3    granzyme B    GMS    gram stain    Grimelius

HHales colloidal iron    HAM56    hamartin    Hansel    HBME    hCG    HE4    Helicobacter pylori    HepPar1    HER2    HGAL    HHF35    HHV8    HIV p24    HLA-DR    HLA-G    HMB45    HPC2    HPL    HPV    hSNF5

I :  ICAM-1    ICE    IgG4    IgH    Inhibin A    Inhibin B    INI1    integrins    interleukins    IRF4   iron

J :  JAK    jun    junB

K :  kappa    Ki67    Kip1    Kras    KSHV

L :  lambda    laminin    LANA    lecithin    lectins    Leder    Leu7    LIN28    lipid    lipochrome    LMO2    LMP    Luxol fast blue    lysozyme

M:  MAC387   MALT1   MART1   Martius   maspin   May-Grunwald-Giemsa   MDM2   mdr   MelanA   melanin   menin   mesothelin   metalloproteinases (MMP)   MIB1   mic2   microphthalmia transcription factor   microsatellite instability   MLH1   MOC31    MRP   MSA   MSH 1&2   mTOR   mucins   MUC1    MUC2   MUC3   MUC4   MUC5AC   MUC6   MUM1   myeloperoxiase   MyoD1   myogenin   myoglobin   myosin

N:  N-CAM   n-myc   NapsinA   neu   neurofilament   neurofibromin   neuron specific enolase   NF2   NF-KB   nonspecific esterase   NPM-ALK   nucleophosmin

O:  OCT4   Oil Red O   OPA1

P:  P glycoprotein   p16   p21   p27   p40   p53   p57   p63   P504S    PAP   PARP   PAS   PAX5   PAX7   PAX8   PCA3   PCNA   PD-1   PDGF   PECAM1   Pentachrome   phosphohistone H3   podoplanin   PKD1   PKD2   PKD3   PLAG1   PLAP   PLEKHA7   PML-RARα   PPARγ   progesterone receptor   PSA   PSAP   PTAH   PTEN   PU.1

R:  Rb    RCC    Reg IV    RET    reticulin    retinoic acid    RUNX1

S:  S100    S100P    SALL4    selectin E    selectin L    selectin P    SHP-1    Sialyl-Tn    silica    Sirius red    SIRT1    smoothelin    SOX2    Sudan Black B    survivin    synaptophysin

T :  tattoo    tau    T-bet    TdT    telomerase    tenascin    thrombomodulin    thyroglobulin    TIA1    TOP2A    TRAP    trichrome    tryptase    TTF1    tuberin    tubulin    tumor necrosis factor    tyrosinase

U :  ubiquitin    unknown primary    uric acid    uroplakin III

V :  VCAM-1    VEGF    VEGFR3    VHL    villin    vimentin    vitronectin    vWF

W :  Warthin-Starry    wnt    Wright-Giemsa    WT1

Y :  

Z :  Ziehl-Neelsen    Cell cycle


Primary references
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American Journal of Clinical Pathology
American Journal of Surgical Pathology
Archives of Pathology & Laboratory Medicine
Human Pathology
Modern Pathology

Albumin

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In-situ hybridization may be specific for hepatocellular carcinoma or hepatoid areas of combined hepatocellular-cholangiocarcinoma (AJSP 2002;26:989)


Alk (see also NPM-ALK)

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Anaplastic lymphoma kinase gene at 2p23; Also called CD246

Membrane spanning tyrosine kinase receptor, member of insulin receptor family

Ligand is growth factor pleiotrophin

3' end contains catalytic domain of tyrosine kinase

t(2;5) associated with T cell anaplastic lymphoma via fusion of ALK and nucleophosmin protein

Has important role in brain development

ALK+ primary anaplastic large cell lymphomas have favorable prognostic significance

ALK- cases of primary anaplastic large cell lymphoma are associated with trisomy 2 (Mod Path 2005;18:235)

Positive staining (normal): normal small intestine, T cells; weakly positive in brain, colon, prostate

Positive staining (disease): T or null cell anaplastic lymphomas (some), inflammatory myofibroblastic tumor (AJSP 2001;25:1364, AJSP 2001;25:761)

Negative staining: fibromatosis, GIST, nodular fasciitis, normal lymphoid tissue

 

Alkaline phosphatase

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Membrane bound glycoproteins, with hepatic, osseous, renal and placental isoenzymes

See PLAP

Positive staining (normal): osteoblasts

Positive staining (disease): mononuclear stromal cells from giant cell tumor of bone and soft tissue (Hum Path 2005;36:945)

 

ALL1

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Gene at 11q23 also called MLL (mixed lineage leukemia), HRX, Htrx (from Drosophila trithorax protein)

Affected by self-fusion translocation of t(11;11)(q23;q23)

Self fusion causes the gene to be dominant negative by fusing with other genes

Trisomy causes loss of function of the gene, leading to B cells with both lymphoid and myeloid phenotypes

Self fusion involves “Alu” sequences, which are conserved elements of repetitive DNA in non-protein coding region

There are 1 million copies of Alu sequences in human genome, each about 300 base pairs in length

Alu mediated recombination causes partial duplication of the ALL1 gene

ALL1 tumors: usually CD10 negative, CD19+, with lymphoid and myeloid markers

Bone marrow transplantation recommended in childhood ALL with t(4;11)(q23;q23) due to otherwise poor prognosis

90% of all cases with ALL abnormalities are t(4;11), t(9;11), t(11;19)

Accounts for 5-10% of acute leukemias, usually M4 or M5

Present in 60% of infants < 1 year with ALL

Abnormal expression in 10% of ALL, 6% of AML, 80% of secondary leukemia after topoisomerase II inhibitor treatment


Alpha-1-antichymotrypsin

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Acute phase plasma protease inhibitor, mainly produced by liver

Homologous to alpha-1-antitrypsin

Positive staining: histiocytes, reticulum cells

Micro images: pancreatoblastoma: C - positive staining

 

Alpha-1-antitrypsin

last updated October 2008

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Enzyme that inhibits proteases, particularly elastase (which digests lung tissue), which is secreted by neutrophils during inflammation Genetic deficiency (due to folding errors, IUBMB Life 2008 Sep 10 [Epub ahead of print]), causes emphysema (Orphanet J Rare Dis 2008; 3:16), cirrhosis (Am J Gastroenterol 2008;103:2136), panniculitis (Dermatol Clin 2008;26:447)

Homologous to alpha-1-antichymotrypsin

Positive staining (normal): histiocytes, reticulum cells, gallbladder, hepatocytes, small intestinal enterocytes (J Clin Invest 1993;92:2022)

Positive staining (disease): various sites-angiosarcoma (hyaline globules), granular cell tumor (J Oral Pathol Med 2000;29:284, Mod Path 1996;9:888), histiocytic lymphoma, MFH, pleomorphic adenoma (epithelium), Rosai-Dorfman disease (focal); bile duct-adenoma-(cytoplasmic inclusions, Int J Surg Pathol 2008;16:218), bladder-yolk sac tumor of urachus; bone-giant cell tumor, cervix-decidual reaction; eye-oncocytoma of conjunctiiva; kidney-renal cell carcinoma-clear cell type; liver- alpha-1-antitrypsin deficiency (cytoplasmic inclusions), focal nodular hyperplasia, hepatoblastoma (40%, Appl Immunohistochem Mol Morphol 2008;16:140), hepatocellular adenoma (cytoplasmic globules), hepatocellular carcinoma, undifferentiated embryonal sarcoma; lung-bronchioloalveolar carcinoma (Clara cells in non-mucinous types); ovary-endodermal teratoma, MMMT and yolk sac tumor (hyaline droplets, Hum Path 1982;13:930); pancreas-cystic fibrosis (mucous globules), neuroendocrine tumor and solid pseudopapillary tumor (AJSP 2000;24:1361); skin-atypical fibroxanthoma; testis-papillary cystadenoma, Sertoli cell tumor and yolk sac tumor (hyaline globules); thyroid-papillary thyroid carcinoma (AJSP 1996;20:956)

Micro images: liver-alpha-1-antitrypsin deficiencyliver-undifferentiated embryonal sarcomalymph node-Kikuchi’s lymphadenitispancreas-solid pseudopapillary tumor #1#2#3pancreatoblastoma: fig Bperipheral giant cell granuloma

References: Wikipedia


Alpha-lactalbumin

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Major protein of human milk

Specific to breast tissue (normal, malignant, fibrocystic) and hydradenoma papilliferum of vulva


AMACR

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Alpha MethylAcyl Coenzyme A Racemase; also called P504S

Identified from prostate adenocarcinoma by cDNA library subtraction coupled with high throughput microarray screening of human prostatic tissue

Also expressed in colorectal adenocarcinoma and other malignancies, but not in normal appearing small and large intestinal mucosa

A mitochondrial and peroxisomal enzyme involved in beta-oxidation of dietary branched-chain fatty acids and fatty acid derivatives (including bile acid intermediates)

Sensitive (82-95%) and relatively specific for prostate carcinoma vs. benign prostate (AJSP 2001;25:1397, AJSP 2002;26:1588)

In prostate carcinoma, is strongly positive, usually diffuse, regardless of Gleason grade

Relatively specific - benign prostate is usually negative or only focal/weakly positive; however partial atrophy and crowded benign glands may be positive (AJSP 2005;29:874)

Most specific if circumferential luminal to subluminal and diffuse cytoplasmic staining

Uses: identify small foci of prostatic adenocarcinoma, in conjunction with 34 beta E12 or p63 (AJSP 2002;26:1169), may identify a subset of AAH with a premalignant potential (AJSP 2002;26:921)

Positive staining (disease): prostatic adenocarcinoma and high grade PIN; partial prostatic atrophy and crowded benign prostatic glands may be positive (AJSP 2005;29:874); also overexpressed in lymphomas and cervical, colorectal adenocarcinoma (69-83%, AJSP 2005;29:890), breast, gastric, liver, ovarian, renal cell carcinomas (AJSP 2002;26:926), urothelial carcinoma (30%), primary (65%) and secondary (from colorectum) bladder adenocarcinomas (Mod Path 2005;18:1217)

Negative staining: benign prostate (usually, see exceptions under positive staining), atypical adenomatous hyperplasia (usually, 10% are positive, AJSP 2002;26:921); small intestinal adenocarcinoma (usually, only 4-6% are positive, AJSP 2005;29:890)

Micro images: fig 3a: primary bladder adenocarcinoma (diffusely+) vs. 3b: secondary from colorectum (focal+)


AML1

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Gene at 21q22 is DNA binding component of AML1/CBF beta transcription factor complex, most frequent target of translocations in AML via t(8;21) [AML1-ETO]; t(12;21); t(3;21) [AML1-EVI1]

Fusion products (below) suppress normal AML1 mediated transactivating activity

Normal AML1 required to establish fetal liver-derived definitive hematopoiesis (stem cells to definitive hematopoietic elements)


APC

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Adenomatous polyposis coli gene on 5q21, tumor suppressor gene, autosomal dominant

Important for familial adenomatous polyposis and Gardner syndromes

Binds to (a) microtubule bundles and promotes cell migration and adhesion, (b) beta-catenin (cytoskeletal protein) in a cellular adhesion complex including E-cadherin, part of Wnt signaling pathway

Beta-catenin is also bound to a T cell factor-lymphoid enhancer factor (Tcf-Lef), which activates other genes, stimulates cell proliferation and inhibits apoptosis

APC accelerates the proteasome-mediated degradation of beta-catenin, which reduces its role as a transactivating factor for the Tcf-Lef pathway

Mutations in APC produce elevated levels of Tcf4-beta-catenin, which stimulates a transcriptional response that initiates polyp formation and eventually malignant growth

APC is considered a gatekeeper gene since it directs activity downstream of different pathways

Colon: mutations play critical role in tumorigenesis (mutations in APC or beta-catenin present in 90% of colon cancers)


API2-MALT1

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Fusion protein associated with MALT lymphoma (50%); rarely with diffuse large B cell lymphoma

Due to t(11;18)(q21;q21) - API2 and MALT1

May lead to increased inhibition of apoptosis, helping MALT lymphoma cells to survive

References: Mod Path 2003;16:1232 (colorectal lymphoma), Hum Path 2003;34:1212 (diffuse large B cell lymphoma)


Apolipoprotein D (apoD)

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Member of lipocalin superfamily of proteins involved in transport of cholesterol, steroid hormones and other small hydrophobic molecules

Correlates with cell cycle inhibition in various situations including cellular senescence

High levels in fibrocystic breast disease and HDL, but produced by almost all tissues in body

Expression upregulated in nonneoplastic regenerating peripheral nerve compared to normal, then downregulated during transformation to MPNST (Hum Path 2005;36:987)

 

Argentaffin

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Argentaffin cells/tissues contains a substance (such as catecholamines, indolamines) that reduces silver and other metallic salts to metallic silver, staining brown or black

Argentaffin stains are: Fontana-Masson, Schmorl's, Autofluorescence, diazonium salt

 

Argyrophilic

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Argyrophilic cells/tissues contain a substance that reduces silver solution to metallic silver after exposure to an extraneous reducing agent, such as hydroquinone or formalin

Argyrophilic stains: Grimelius (with Bouin's fixative), Churukian-Schenk’s modification, Pascual's


Asbestos

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Special type of long-thin silica crystal, usually from mineral group chrysotile

Highly fibrogenic in tissue

Called ferruginous bodies in tissue - fibers coated with protein-iron-calcium matrix, giving them a shish-kebab appearance; highlighted with iron stain

Image: Asbestos body, unstained

Image: Asbestos bodies, iron stain


ATM

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Ataxia telangiectasia mutation

Mutations cause suboptimal induction of p53 dependent signaling after exposure to DNA damaging agents, which causes an increase in mitotic recombination


B72.3

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Definition: monoclonal antibody that recognizes tumor-associated glyocoprotein 72 (TAG-72), a mucin-like sugar and protein complex on the surface of many cancer cells

Antibody is directed against the Sialyl-Tn blood group antigen

Intrepretation: cytoplasmic staining

Uses:

(1) distinguish pulmonary adenocarcinoma (positive) from mesothelioma (negative) as part of a panel (Diag Cytopathol 1997;17:115)

(2) distinguish carcinoma in cytology specimens (positive) from benign effusions (usually negative, but may have focal staining, J Clin Pathol 1990; 43:1026, Acta Cytol 1987;31:537, Diag Cytopathol 2007;35:300)

(3) confirm diagnosis of breast apocrine carcinoma (APMIS 2006;114:712)

Positive staining (normal tissue): colonic mucosa (Hum Pathol 1989;20:994), endometrium-secretory, endometriosis (J Clin Endocrinol Metab 1993;76:1075), gastric/duodenal goblet cells-coarsely granular, gastric/duodenal epithelium-finely granular (Diagn Cytopathol 2005;33:381)

Positive staining (malignancies): angiosarcoma-epithelioid, breast apocrine carcinoma (92%), breast ductal carcinoma, colonic adenocarcinoma, endometrial carcinoma, esophageal squamous cell carcinoma, lung adenocarcinoma, ovarian serous tumors and implants, pancreatic ductal adenocarcinoma and intraductal oncocytic papillary neoplasm, prostatic adenocarcinoma, salivary gland carcinoma including duct carcinoma, mucoepidermoid carcinoma (Laryngoscope 1994;104:304) and malignant mixed tumor; testicular ovarian surface epithelial-like tumor, testicular serous papillary carcinoma, vulvar Paget’s disease

Negative staining (normal tissue): mesothelial cells, most benign cells except colon, duodenum, endometrium, gastric

Negative staining (disease): adrenocortical adenoma, adrenocortical carcinoma, anaplastic meningioma, lung small cell carcinoma, mesothelial cell inclusions in lymph nodes, mesothelial cysts in the kidney, mesothelioma, ovarian adnexal tumor of probable wolffian origin, ovarian primary retroperitoneal mucinous cystadenoma, ovarian small cell carcinoma-hypercalcemic type

Micro images: bronchioalveolar carcinoma of lung: A-H&E, B-cytoplasmic staining for CEA, C-cytoplasmic staining for B72.3


bcr-abl

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Protein fusion product formed by t(9;22)(q34;q11), called the Philadelphia chromosome

Either p210 or p185 hybrid proteins

p210 formed by bcr from 5' to b2/b3 of M (major)-bcr joined to second exon of c-abl (between IA and IB); has constitutive tyrosine kinase activity; associated with chronic myelogenous leukemia

p185 formed by bcr from 5' to m (minor)-bcr; more potent tyrosine kinase than p210; associated with ALL or AML

abl overexpression causes resistance to apoptosis  induced by Fas, ceramide or chemotherapy

Found in 25% adult ALL, 5% pediatric ALL; 95%+ of patients with CML

Poor prognostic factor in pediatric ALL


Beta-2-microglobulin

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Forms light chain of HLA molecule

Present on surface of all nucleated cells

Increased levels in multiple myeloma

Beta 2 microglobulin amyloidosis is related to renal dialysis, increasing with duration of therapy and patient age

 

Beta-catenin

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Gene is also called CTNNB1

Physiology: cytoplasmic protein normally adjacent to cell membrane, where it interacts with cytoplasmic domains of E-cadherin; E-cadherin and beta-catenin complex is connected to cytoskeletal actin by alpha-catenin; thus beta-catenin stabilizes E-cadherin, and participates in cell-cell adhesion mediated by E-cadherin

Important regulator of cell growth

Beta-catenin and T cell factor (Tcf) are also distal components of the highly conserved Wnt pathway that govern cell fate and proliferation in lower organisms; binds to APC; also binds to a T cell factor-lymphoid enhancer factor (Tcf-Lef), which activates other genes, stimulates cell proliferation and inhibits apoptosis; APC accelerates the proteasome-mediated degradation of beta-catenin, which reduces its role as a transactivating factor for the Tcf-Lef pathway

Diagrams: #1#2

Mutations: mutations in APC produce elevated levels of Tcf4-beta-catenin, which stimulates a transcriptional response that initiates polyp formation and eventually malignant growth; mutations in beta-catenin itself can cause its activation

Colon: plays critical role in tumorigenesis (mutations in APC or beta-catenin present in 90% of colon cancers)

Uterus: endometrioid endometrial carcinoma is associated with beta-catenin mutations

Interpretation: nuclear staining is significant in fibroblasts, nuclear or cytoplasmic staining is significant in epithelial cells

Uses:

(1) distinguish mesenteric fibromatosis (positive with nuclear staining due to mutations in APC/beta-catenin pathway causing nuclear accumulation) from GIST tumors (negative) and sclerosing mesenteritis (negative, AJSP 2002; 26:1296)

(2) distinguish deep fibromatoses (diffuse or rarely focal nuclear staining) from low grade fibromyxoid sarcoma and other myofibroblastic or fibroblastic tumors/sarcomas (negative for nuclear staining, AJSP 2005;29:653)

Positive staining (normal): fibroblasts and endothelial cells (cytoplasmic-membranous staining)

Positive staining (disease): desmoid-type fibromatosis, solitary fibrous tumors (nuclear staining in 33%, remainder had membranous or membranous/cytoplasmic staining, Archives 2005;129:776); endometrioid carcinoma of endometrium and ovary, particularly squamous morules (Hum Path 2005;36:605)

Negative staining: GIST, sclerosing mesenteritis, low grade fibromyxoid sarcoma, myofibroblastic or fibroblastic tumors

Micro images: patterns of staining in solitary fibrous tumorhighly malignant adult hepatic blastoma - fig A: ferritin; B: alpha-fetoprotein; C: HepPar1; D: CK8; E: p53; F: beta-catenin


Bielschovsky

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Highlights neurofibrillary tangles

 

Biotin

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Interpretation: H&E shows optically clear nuclei or biotin-rich intranuclear inclusions; presence of biotin may cause false positive staining with avidin-peroxidase method

Positive staining (normal): pregnancy-related endometrium

Positive staining (disease): granulosa cell tumor-like variant of endometrioid carcinoma of ovary (Archives 2005;129:1288); also endometriotic cysts, morule-forming endometrioid carcinoma

Micro images: granulosa cell tumor-like variant of endometrioid carcinoma of ovary (figure 2C)


Blood group antigens (A, B, H)

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Glycolipids in cell membranes of RBCs and epithelial cells


BMP

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Bone Morphogenetic Proteins

Members of transforming growth factor-beta (TGF-beta) superfamily (20 types cloned through October 2005)

Used for intercellular signals including cell growth and differentiation

Ubiquitous in embryonic development; also involved in apoptosis

Blocking their activity in chickens leads to duck feet

Deletion causes lack of mesoderm development, lack of sperm development, eye/kidney deformities, misshapen feet

Overexpression associated with fibrodysplasia ossificans progressiva, various bone and soft tissue sarcomas

Colonic adenocarcinoma: BMP5 and BMP6 prominent in cytoplasm of tumor cells, BMP2 and BMP4 strongly expressed in surrounding mesenchymal cells (Archives 2005;129:1347)


Cadherins

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See also E-cadherin, N-cadherin

Molecules that establish links between adjacent cells by forming zipper like structures at adherens junctions

Linked to cytoskeleton via catenins (cadherin to beta catenin, beta catenin to alpha catenin, alpha catenin to actin) to stabilize adherens junction

Homophilic interactions (like-like) causes clustering of embryonic cells with others from same tissue

Loss of cadherins may be first step in giving cells invasive properties


Calcium stains

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With routine staining, calcium forms a blue-black lake with hematoxylin, usually with sharp edges.

von Kossa method: silver is substituted for calcium in calcium salts; light or a photographic developer turns the silver black; only stains calcium bound to an anion such as phosphate or carbonate; most useful when large amounts of phosphates and carbonates are present, as with bone

Alizarin red S forms an orange-red lake with calcium at a pH of 4.2; works best with small amounts of calcium such as in Michaelis-Gutman bodies; this method is used on Dupont ACA analyzer to measure serum calcium photometrically

Azan stain used to distinguish osteoid from mineralized bone.

Micro images: malakoplakia of bladder (von Kossa calcium stain)


h-Caldesmon - Stains chapter

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Caldesmon binds calcium, calmodulin, tropomyosin and actin, and regulates smooth muscle contraction (Int J Biochem Cell Biol 1997;29:1047)

h-caldesmon is its high molecular weight isoform, found in smooth muscle cells; l-caldesmon isoform is distributed in non-muscle cells (J Biol Chem 1991;266:355)

Uses:

(1) very useful to distinguish smooth muscle cells/lesions (positive) from myofibroblastic cells/lesions (negative or only a few cells positive, AJCP 2000;114:746, Am J Dermatopathol 2006;28:105)

(2) distinguish uterine leiomyoma or leiomyosarcoma (positive) from endometrial stromal tumors (negative, AJSP 2001;25:455), but endometrial stromal tumors may have focal smooth muscle differentiation (AJSP 2002;26:1142)

(3) sensitive and specific for epithelioid peritoneal mesothelioma (positive) versus ovarian serous carcinoma (negative, AJSP 2007;31:1139) and epithelioid pleural mesothelioma (positive) versus pulmonary adenocarcinoma (negative, AJSP 2006;30:463)

Note: may be negative in epithelioid smooth muscle tumors of uterus (AJSP 2006;30:319)

Positive staining (normal): smooth muscle cells (vascular, visceral)

Positive staining (disease): angioleiomyoma (Hum Path 2007;38:645), gastrointestinal stomal tumor (61%, Pathol Oncol Res 2005;11:11), glomus tumor (Hum Path 1999;30:392), inflammatory myofibroblastic tumor (focal, AJSP 2006;30:1502), leiomyoma/leiomyomatosis (Eur J Gynaecol Oncol 2004;25:481), leiomyosarcoma (AJSP 2004;28:178 and references above, but see Appl Immunohistochem Mol Morphol 2001;9:302), myopericytoma (AJSP 2006;30:104), perivascular epithelioid cell tumors (Int J Gynecol Pathol 2005;24:341)

Negative staining (normal): endometrium, endometrial stroma, myofibroblasts (J Submicrosc Cytol Pathol 2005;37:231), pericytes

Negative staining (disease): endometrial stromal tumor (references above), fibromatosis, myofibroblastoma (Pathology 2005;37:144), myofibroblastic lesions (Int J Surg Pathol 2005;13:57), nodular fasciitis, rhabdomyosarcoma (AJSP 2005;29:1106), synovial sarcoma (AJSP 2002;26:1434)

Micro images: colon-pericrytal fibroblast sheath (fig A)leiomyosarcoma #1#2-bladder (fig 2)lipoleiomyosarcoma (fig 4)mixed tumor of vagina-stromal cells (fig d)


Calponin - Stains chapter

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Actin filament associated regulatory protein

h1 (basic) isoform is smooth muscle specific, but a late stage smooth muscle marker; described below

h2 isoform is found in smooth muscle and non muscle cells; not described below

Uses:

(1) identify myoepithelial cells in breast lesions (Histopathology 2005;47:202)

(2) help differentiate breast collagenous spherulosis (positive) from adenoid cystic carcinoma (negative, Mod Path 2006;19:1351), although adenoid cystic carcinoma is calponin positive in salivary gland tumors (Archives 1999;123:801)

Positive staining (normal): smooth muscle, myoepithelial cells (most but not all, Breast Cancer Res 2003;5:R151), myofibroblasts (AJSP 2003;27:82, Proc Natl Acad Sci USA 1993;90:999); also keratinocytes and nerve fibers (Virchows Arch 2000;437:58), choroidal non-vascular smooth muscle cells (J Anat 2005;207:381)

Positive staining (disease): atypical fibroxanthoma (30%, Virchows Arch 2002;440:404), benign fibrous histiocytoma (65%), collagenous spherulosis (Mod Path 2006;19:1351), DFSP (40%), fibromatosis (Am J Dermatopathol 2006;28:105), fibrosarcoma (60%), glomus tumor (AJSP 2002;26:301), leiomyoma, leiomyosarcoma, MFH of bone (47%, J Clin Pathol 2002;55:853), MPNST (40%), myoepithelioma-skin, myofibroblastic lesions, myofibroblasts in desmoplastic stroma of carcinomas, nodular fasciitis, solitary fibrous tumor (70%), synovial sarcoma (Histopathology 2003;42:588)

Negative staining (disease): adenoid cystic carcinoma

Micro images:

breast - adenoid cystic carcinoma (fig e) versus collagenous spherulosis (fig j)adenomyoepithelioma (fig I)myoepithelial cells #1#2phyllodes tumor-malignant, metastatic (fig d)sclerosing lobular hyperplasia 

salivary gland - adenoid cystic carcinoma-submandibular glandbasal cell adenomaepithelial-myoepithelial carcinoma

other - hidradenoma papilliferum;  MFH of bone (fig B, F);  pleomorphic adenoma of nasal cavity (fig 4b)


CDC2 / CDK1

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Also called Cyclin Dependent Kinase 1

Member of cyclin dependent kinase family, which regulates phase transitions and checkpoints within the cell cycle

Nuclear protein that is subunit of M phase promoting factor, together with cyclin B subunit

Not expressed in normal esophagus; rare to occasional expression in Barrett’s esophagus with low grade dysplasia, increasing to diffuse expression in 95% with high grade dysplasia; expression correlates with progression of esophageal adenocarcinoma in cell lines (AJSP 2005;29:390)

EM-1521, a CDC2/CDK1 inhibitor, is theoretical antitumor therapy for esophageal adenocarcinoma

Low levels associated with reduced survival in mantle cell lymphoma (Mod Path 2005;18:1223)

Interpretation: staining in mantle cell lymphoma is predominantly cytoplasmic and partial nuclear

Positive staining (normal): germinal center (but not mantle zone) of benign lymph nodes

Micro images: staining in tonsil (fig 2b), mantle cell lymphoma (2e/2f)


Ceramide

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Members of the class of neutral glycosphingolipids

Basic units of sphingolipids

Are sphingoids attached via their amino groups to a long chain fatty acyl group

Fabry’s disease: abnormally accumulate


Chaperones

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Proteins which help other proteins fold correctly by transient binding to interactive surfaces (hydrophobic areas), which otherwise might aggregate

Name is accurate since it has no actual positive effect but prevents negative effects

Important after environmental stress which causes proteins to unfold

As a translated protein grows, it becomes increasingly available to chaperones; the protein is released into the intracellular space only when it is folded enough to prevent aggregation


Chloroacetate esterase

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Also called specific esterase, naphthol AS-D chloroacetate esterase

Useful for demonstrating myeloid differentiation, although negative in 25% of cases, particularly with immature granulocytic and monocytic neoplasms (Archives 2005;129:32)

Enzyme cytochemistry-positive: AML-M1, M2, microgranular M3; granulocytic sarcomas, neutrophils

Enzyme cytochemistry-negative: ALL


Chromaffin

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Chromaffin cells have cytoplasmic granules that appear brown when fixed with a dichromate solution

Traditionally associated with adrenal medulla or extraadrenal paraganglion tissues (pheochromocytomas)

Types of stains for chromaffin include: Modified Giemsa, Schmorl's, Wiesel's


Claudins

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Multigene family of integral membrane proteins active in tight junction formation and function

At least 24 known members, expressed in tissue specific pattern; usually cells from a specific organ express multiple claudin proteins

Variation in expression associated with malignant tumors

Positive staining (normal): epithelial and endothelial cells


Clusterin

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Glycoprotein implicated in apoptosis and other cellular functions

Strongly expressed in follicular dendritic cell tumors, weak/no expression in other dendritic cell tumors

Among spindle cell neoplasms, has high sensitivity and specificity for follicular dendritic cell tumors (Mod Path 2005;18:260)

Positive stains (disease): anaplastic large cell lymphoma (80-100% of systemic cases, 40-60% of primary cutaneous cases), diffuse large B cell lymphoma (12%), carcinomas of breast, colon, pancreas, prostate

Micro images: follicular dendritic cell tumor: H&E and clusterin (b/e)


c-MET

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Gene at 7q31-34; receptor for hepatocyte growth factor receptor

A tyrosine kinase that mediates cell motility, proliferation, invasiveness, angiogenesis and morphogenetic differentiation

Activating mutations are present in papillary renal cell carcinoma; missense mutation in 6% of thyroid carcinoma (papillary, follicular and medullary, AJSP 2005;29:544); high levels of MET mRNA and protein expressed in papillary thyroid carcinoma

Positive staining (disease): melanoma, melanocytic lesions


c-myc

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Proto-oncogene at 8q24.1 produces short lived nuclear phosphoprotein

Overexpressed by t(8;14)(q24;q32.3), t(8;22);(q24;11) and t(2;8);(p11-12;q24), which translocate c-myc gene next to immunoglobulin genes in Burkitt’s lymphoma

Gene expressed in virtually all eukaryotic cells; expression usually tightly controlled

Immediate early growth response gene; rapidly induced when quiescent cells receive a signal to divide; required for cells to enter S phase

By itself, binds DNA poorly; forms stable sequence specific DNA binding heterodimers with max; myc-max recognizes E-box sequence CACGTG and activates transcription of nearby growth promoting genes

Has leucine zipper motif: leucine residues that project from every other turn of the alpha helix (every 7th amino acid is leucine), which interdigitates with another leucine zipper

In humans, deletion causes embryonic death

t(8;14) also frequent in AIDS-related lymphomas, diffuse large-cell lymphomas, posttransplant lymphoproliferative disease, B-ALL (leukemic counterpart of Burkitt's lymphoma)

t(8;14)(q24;q11) present in 10-15% T-ALL

Breast cancer: amplified in 20-30% of cases; associated with HER2 amplification and poor outcome (Hum Path 2005;36:634)

Burkitt’s lymphoma: 90% have translocation of c-myc or variants; translocation causes continuous stimulation by adjacent enhancer element of immunoglobulin gene or mutations in myc gene regulatory sequences, that leads to increased constitutive levels; continuous growth stimulation may lead to polyclonal pre-B proliferations, then clonal proliferations, usually ALL-L3

Lung-small cell carcinoma: amplified

Neuroblastoma: amplified


Collagen

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Type I collagen: dermis, tendons and bone

Type II collagen: cartilage

Type III collagen: fetal skin, scars, arterial walls

Type IV collagen: normal constituent of basement membrane surrounding noninvasive glandular epithelium

There is discontinuous or complete absence of basement membrane staining surrounding colonic adenocarcinoma, AJSP 2002;26:206

Uses: double immunostaining of type IV collagen with cytokeratin is useful to detect microinvasion in VIN or CIN (Archives 2005;129:747)

Micro images: double immunostaining with cytokeratin #1; #2


Collagen - type II

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Specific marker of normal and neoplastic chondrocytes

Specific and sensitive for mesenchymal chondrosarcomas vs. other small cell sarcomas except chondroblastic small cell osteosarcomas (Mod Path 2005;18:1088)

Micro images: mesenchymal chondrosarcoma - a1-c1: H&E; a2-c2: vimentin; a3-c3: S100; a4-c4: collagen type II


Congo red

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Also called amyloid stain

Must examine stained tissue with standard and polarized light

Amyloid under polarized light has apple green birefringence, based on the molecule being in an antiparallel beta-pleated sheet.

Note: non-amyloid related green birefringence can occur due to excess dye retained by the tissue

Micro images: medullary carcinoma of thyroid gland-staining lower right; amyloid in adrenal gland; primary localized laryngeal amyloidosis (polarized light-fig F); amyloid tumor of breast - fig 1: coarse calcifications of right breast; 2: H&E; 3: Congo red staining; 4: Congo red under polarized lightcardiac amyloidosis under polarized light


CXCR3

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Also called CD183

Receptor for some chemokines; binding of chemokines to CD183 induces integrin activation, cytoskeletal changes and chemotactic migration in inflammation-associated effector T cells

CD183+ T cells detected in inflamed tissues of patients afflicted with juvenile rheumatoid arthritis, multiple sclerosis, sarcoidosis, hepatitis C

Positive staining (normal): T cells in inflamed tissue, eosinophils, plasmacytoid dendritic cells, hematopoietic progenitors

Negative staining: naďve T cells in peripheral blood


Cyclins

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Regulatory subunits of cyclin dependent kinases (CDKs)

Control the passage of proliferating cells through key checkpoints in the cell cycle (G1 to S, G2 to M) through overexpression of positive growth regulators such as cyclin dependent kinases (CDKs) and underexpression of inhibitory growth regulators, such as CDK inhibitors


Cyclooxygenase 2 (COX2)

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Cyclooxygenases 1 (COX1) and 2 (COX2), also known as prostaglandin H synthase, catalyze formation of prostaglandin from arachidonic acid

COX1 is constitutive form of enzyme on 9q; COX2 is inducible isoform on 1q, has 61% sequence homology with COX1

Regulated by mitogens, tumor promoters, cytokines, serum, free fatty acids, NSAIDs, selective COX2 inhibitors

Increased expression associated with poor clinical outcome in stage I/II non-small cell lung carcinoma (Archives 2005;129:1113), possibly poorer outcome in follicular thyroid carcinoma (Archives 2005;129:736)

Interpretation: cytoplasmic staining

Positive staining (normal): endothelial cells

Positive staining (disease): breast, colorectal, esophageal, liver, lung, ovary, pancreas, prostate, skin, stomach tumors

Micro images: lung adenocarcinoma (A: COX2+; B: COX2-; C: endothelial cells are positive control); fig 7-staining in follicular carcinomaarachidonic acid pathway


Cytokeratins (CK) - general

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Definition: family of water-insoluble intracytoplasmic structural proteins that are the dominant intermediate filament proteins of epithelial and hair forming cells; also present in epithelial tumors

Within a cell, form a dense network radiating from the nucleus to the plasma membrane

Act as cytoplasmic scaffold that gives epithelial cells the ability to sustain mechanical and non-mechanical stress

Keratin intermediate filaments are highly dynamic structures and are reorganized during mitosis and apoptosis; reorganization is mediated by posttranslational phosphorylation, glycosylation, transglutamination and proteolysis, or through interaction with 14-3-3 or other proteins

Expression depends on cell type and differentiation status

Over 25 subtypes are defined based on molecular weight (40 to 68 kDa) and isoelectric pH (5 to 8)

Moll catalog number (Cell 1982;31:11) ranges from 1 (highest molecular weight) to 23 (lowest molecular weight)

New nomenclature exists (J Cell Biol 2006;174:169)

Divided into Type I (acidic; CK10, CK12-19, 40-56.5 kDa) and Type II (neutral-basic, CK1-CK8, 53-67 kDa)

Type I genes are expressed at 17q21.2, type II genes at 12q13.13

Proteins are obligate heteropolymers with equimolar amounts of type I and type II proteins that form functional filaments, such as CK8/18, CK5/14, CK1/10

Also divided into low molecular weight (CAM 5.2, 34 beta E11) and high molecular weight (34 beta E12); pankeratin cocktails contain AE1 and AE3 and possibly also CAM 5.2

Genes are KRT1 for keratin 1, KRT2 for keratin 2, etc.

Uses:

(1) diagnose epithelial (cytokeratin+) versus nonepithelial cells / tumors (usually cytokeratin negative but there are many exceptions)

(2) diagnose particular types of epithelial tumors based on staining patterns of particular cytokeratins - dot like staining is suggestive of neuroendocrine tumors

(3) in rebiopsies of tumors, don’t assume that all keratin+ cells are residual tumor cells (AJSP 2007;31:390)

Negative staining (usually): endothelium, mesenchymal cells

Micro images: cytokeratin network of cell #1#2 (CK8, 18, 19)

 

Cytokeratin 1 (CK1, K1)

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Highest molecular weight keratin (67-68 kDa)

Produced by KRT1 gene in complex manner (PLoS Genet 2006;2:e93)

Associates with CK10

Keratin 1b is expressed in eccrine sweat glands (J Invest Dermatol 2005;125:428)

Reduced expression in HPV infection (Cancer Res 1990;50:3709)

Mutations are associated with epidermolytic hyperkeratosis / bullous congenital ichthyosiform erythroderma (Dermatol Online J 2006;12:6), Greither’s syndrome (J Am Acad Dermatol 2005;53:S225), striate palmoplantar keratoderma (J Invest Dermatol 2002;118:838)

Uses: no significant clinical use by pathologists

Positive staining (normal): endothelial cells, skin and other squamous epithelium (suprabasal spinous and granular layers), thymic Hassal’s corpuscle

Positive staining (disease): angiosarcoma (73%), epithelioid hemangioendothelioma (100%), epithelioid sarcoma (70%), hemangioma (often), schwannoma (62%), squamous cell carcinomas-keratinizing, synovial sarcoma (28%), vascular tumors (greater in well versus poorly differentiated tumors)

Micro images: eccrine sweat gland expression

References: Hum Path 2001;32:873, OMIM 139350

 

Cytokeratin 2 (CK2, K2)

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Molecular weight (CK2e) is 65.5-65.8 kDa

Associates with CK10 (UniProtKB)

Mutations cause ichthyosis bullosa of Siemens (Br J Dermatol 2005;152:1353)

K2e (epidermis) and K2p (palate) are encoded by separate genes, with < 75% identity at primary structural level; thus, are not true isoforms, although they cannot be distinguished by conventional 2D electrophoresis (HopkinsMedicine)

Uses: no significant clinical use by pathologists

Positive staining (normal): skin (upper spinous and granular cells, Br J Dermatol 1999;140:582)

References: OMIM 600194, Exp Cell Res 1992;202:132

 

Cytokeratin 3 (CK3, K3)

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Molecular weight is 64-65 kDa

Associates with CK12

Mutations in KRT3 gene may cause Meesmann corneal dystrophy (Cornea 2005;24:928)

Uses: no significant clinical use by pathologists

Positive staining (normal): corneal epithelium (full thickness), limbus epithelium (suprabasal)

Negative staining: conjunctival epithelium

Micro images: suprabasal staining of limbus epithelium cultured using air-lifting (AL) technique (fig A/B)

References: OMIM 148043

 

Cytokeratin 4 (CK4, K4)

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Molecular weight is 59 kDa

Associates with CK13

Downregulated in head and neck squamous cell carcinoma (Acta Otolaryngol 2006;126:967)

Uses: no significant clinical use by pathologists

Case reports: mutation in KRT4 gene causes white sponge nevus (Br J Dermatol 2003;148:1125)

Positive staining (normal): suprabasal cells of nonkeratinized stratified squamous epithelium of esophagus and cornea; also anus, larynx, pharynx, tongue (J Biol Chem 1998;273:23912)

Micro images: epidermis before and after treatment with retinoic acid

References: OMIM 123940

 

Cytokeratin 5 (CK5, K5)

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Molecular weight is 58 kDa

Major partner is CK14, but related to cytokeratin 6 (antibodies are often to CK5/6)

Common antibody is 34BE12

Mutations may cause epidermolysis bullosa simplex (Hum Mutat 2006;27:719), Dowling-Degos disease (Am J Hum Genet 2006;78:510)

Important in tooth enamel formation (J Biol Chem 2003;278:20293)

Interpretation: diffuse cytoplasmic staining with perinuclear enhancement (AJSP 2001;25:43)

Uses:

(1) helps defines a basal-like subtype of invasive ductal carcinoma of the breast that is usually CK5/6+, ER-, PR-, HER2-, EGFR+ with poorer prognosis (Clin Cancer Res 2006;12:1533); associated with premenopausal African American women (JAMA 2006;295:2492), BRCA1 (J Natl Cancer Inst 2003;95:1482, Mod Path 2005;18:1321) and brain metastases (AJSP 2006;30:1097)

(2) defines a DCIS subtype with poorer prognosis (Hum Path 2007;38:197);

(3) distinguish breast usual ductal hyperplasia (strong staining) from solid papillary DCIS (negative, Hum Path 2006;37:787)

(4) p63+ and CK5/6+ poorly differentiated metastatic carcinomas are likely to have squamous carcinoma primaries (AJCP 2001;116:823)

(5) distinguish epithelioid mesothelioma (CK5/6+ cytoplasmic staining with perinuclear enhancement) from lung adenocarcinoma (usually CK5/6 negative, Histopathology 2006;48:223); also in pleural effusions (Diagn Cytopathol 2006;34:801)

(6) distinguish cutaneous spindled squamous cell carcinoma (CK5/6+ in 100%) from superficial epithelioid sarcoma (rare focal positivity, Cutan Pathol 2003;30:114)

 

Cytokeratin 5 (continued)

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Positive staining (normal): breast myoepithelial cells, cornea (Exp Eye Res 2004;78:1137), mesothelium, nail unit of adults (Br J Dermatol 2004;151:362), prostate basal cells (J Pathol 2001;195:563) skin (basal layer), salivary glands (basal layer), spermatogenic cells (Mol Reprod Dev 2002;61:1), squamous epithelium (basal cells), urothelium (basal layer, Mol Cell Proteomics 2002;1:269)

Positive staining (not carcinoma): cutaneous amyloidosis (primary and secondary, Arch Dermatol Res 2004;296:83), epithelioid sarcoma (rare to 30%, focal, Archives 2003;127:1161), mesothelioma (references above), salivary gland tumors, thymoma

Positive staining (carcinoma): adrenocortical neoplasms (adenoma and carcinoma, pediatric-75%, AJSP 2003;27:867), basal cell, breast-basal subtype (references above), endometrial adenocarcinoma (50%), lung (adenocarcinoma-12 to 56%, Hum Path 2006;37:542; squamous cell (87-100%, AJSP 2003;27:150), ovarian adenocarcinoma (25%), pancreatic adenocarcinoma (38%), squamous cell (all sites), urothelial (62%)

Negative staining: colonic adenocarcinoma, gastric adenocarcinoma, germ cell tumor, hepatocellular carcinoma, large cell neuroendocrine carcinoma, small cell carcinoma (usually), renal cell carcinoma, synovial sarcoma (biphasic), thyroid tumors

Micro images: breast carcinoma-basal subtype in BRCA1 patientbreast-variousgallbladder adenosquamous carcinomamesothelioma #1#2#3-deciduoid (fig 5)ovarian serous carcinoma (fig b)pancreas-adenosquamous carcinomaskin (normal)squamous cell carcinoma-oral (fig a)benign epithelial inclusions of axillary lymph nodes - fig 1: CK5/6+; 2: p63+various images #1 (squamous cell-fig 1A, urothelial-fig 1C, thymoma-fig 1E, salivary gland adenoid cystic-fig 1G)#2 (ovary-fig 2A, endometrioid adenocarcinoma of uterus-fig 2C, infiltrating ductal carcinoma of breast-fig 2E)

Contributed by Leica Microsystems, Biosystems Division - mesothelioma-Cytokeratin 5 (XM26) with intense cytoplasmic and membranous staining

References: Mod Path 2002;15:6-free full text, OMIM 148040

 

Cytokeratin 6 (CK6, K6)

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Molecular weight is 56 kDa; major isoform is 6A

Related to cytokeratin 5 (Hopkinsmedicine)

Paired with CK16 and CK17

Mutations cause pachyonychia congenita (Ann N Y Acad Sci 2006;1082:56)

Upregulated in conjunctiva in Sjogren's syndrome (Exp Eye Res 2003;77:17) and in cornea in keratoconus (Invest Ophthalmol Vis Sci 2003;44:2466)

Marker of hyperproliferative and activated keratinocytes found in psoriasis (Dermatology 2000;201:15), wound healing and other inflammatory disorders (J  Invest Dermatol 2001;116:330)

Uses:

(1) helps defines a basal-like subtype of invasive ductal carcinoma of the breast that is usually CK5/6+, ER-, PR-, HER2-, EGFR+ with poorer prognosis (Clin Cancer Res 2006;12:1533); associated with premenopausal African American women (JAMA 2006;295:2492), BRCA1 (J Natl Cancer Inst 2003;95:1482) and brain metastases (AJSP 2006;30:1097)

(2) defines a DCIS subtype with poorer prognosis (Hum Path 2007;38:197);

(3) distinguish breast usual ductal hyperplasia (strong staining) from solid papillary DCIS (negative, Hum Path 2006;37:787)

(4) p63+ and CK5/6+ poorly differentiated metastatic carcinomas are likely to have squamous carcinoma primaries (AJCP 2001;116:823)

(5) distinguish epithelioid mesothelioma (CK5/6+ cytoplasmic staining with perinuclear enhancement) from lung adenocarcinoma (usually CK5/6 negative, Histopathology 2006;48:223); also in pleural effusions (Diagn Cytopathol 2006;34:801)

(6) distinguish cutaneous spindled squamous cell carcinoma (CK5/6+ in 100%) from superficial epithelioid sarcoma (rare focal positivity,

Cutan Pathol 2003;30:114)

Positive staining (normal): esophagus, epidermal and epithelial glands, hair and nails, oral mucosa, stomach, tongue (filiform papillae)

Positive staining (disease): psoriasis, other skin disorders (see above)

Micro images: breast carcinoma-basal subtype in BRCA1 patientgallbladder adenosquamous carcinomakeratoconus (fig A), normal cornea (fig D)mesothelioma-deciduoid (fig 5)ovarian serous carcinoma (fig b)pancreas-adenosquamous carcinomaskin-various imagessquamous cell carcinoma-oral (fig a)benign epithelial inclusions of axillary lymph nodes - fig 1: CK5/6+; 2: p63+various images #1 (squamous cell-fig 1A, urothelial-fig 1C, thymoma-fig 1E, salivary gland adenoid cystic-fig 1G)#2 (ovary-fig 2A, endometrioid adenocarcinoma of uterus-fig 2C, infiltrating ductal carcinoma of breast-fig 2E)

References: OMIM 148041, Wikipedia, J Invest Dermatol 2000;115:795


Cytokeratin 8 (CK8, K8)

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Low molecular weight keratin (52.5-53.5 kDa)

Usually paired with cytokeratin 18

Component of nuclear inclusions of rhabdoid tumors (composed of tangled CK8 and vimentin) and Mallory bodies

Mutated in malignant rhabdoid tumor (Mod Path 2002;15:146-free full text), chronic pancreatitis (9%, Dig Liver Dis 2003;35:416), liver disease (Proc Natl Acad Sci USA 2003;100:6063)

May protect hepatocytes from oxidative stress

Cleaved by Chlamydia during infection to permit vacuole expansion necessary for replication (Infect Immun 2004;72:3863)

Uses:

(1) confirm epithelial nature of tissue / tumors

(2) assess sentinel lymph nodes in colon carcinoma (Scand J Gastroenterol 2006;41:1073)

Positive staining (normal): simple type (single layer) epithelium including breast ducts (luminal cells), gallbladder, intestine, liver (hepatocytes and bile ductules), pancreas, prostate (basal cells and secretory cells)

Positive staining (not carcinoma): ameloblastoma (stellate reticulum-like areas, Oral Dis 1999;5:111), autoimmune hepatitis (90%, Acta Cytol 2007;51:61), Mallory bodies (J Cell Biol 2005;171:931), rhabdoid tumor (references above)

Positive staining (carcinoma): bile duct, breast (invasive ductal and DCIS), hepatocellular, neuroendocrine, pancreatic, prostate, renal cell, squamous cell (cervix-57%, Hum Path 2004;35:546; oral cancers-62% from smears, Eur J Cancer B Oral Oncol 1994;30B:405), stomach (97%, Hum Path 2004;35:576)

Negative staining: adamantinoma of long bone (Histopathology 1994;25:71), smooth muscle tumors (although may be false positives, Pathol Res Pract 2007;203:31)

Micro images: hepatic blastoma-adult (fig D)hepatocytes (residual) are CK8+ in embryonal sarcoma of liverliver disease (various)malignant rhabdoid tumor (fig c)prostatic adenocarcinoma-top and benign prostate-bottomsquamous cell carcinoma-oral (fig c/d)various carcinomas (breast, colon, lung-squamous cell, prostate)

Contributed by Leica Microsystems, Biosystems Division - colon (normal)-Cytokeratin 8/18 (5D3) with intense cytoplasmic and membranous staining

References: OMIM 148060

 

Cytokeratin 9 (CK9, K9)

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Molecular weight of 64 kDa (HopkinsMedicine)

Partner may be CK1

Regulated by dermal fibroblasts (J Invest Dermatol 1999;112:483)

Mutations cause epidermolytic palmoplantar keratoderma (J Invest Dermatol 1998;111:1207)

Uses: no significant clinical use by pathologists

Positive staining (normal): suprabasal epidermis of palms and soles (J Invest Dermatol 1999;112:483), spermatogenic cells (Mol Reprod Dev 2002;61:1)

References: OMIM 607606, Wikipedia

 

Cytokeratin 10 (CK10, K10)

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Molecular weight of 56.5 kDa

Partner of CK1

CK1 and CK10 are present in suprabasal terminally differentiating cells

Mutations in CK10 or CK1 cause epidermolytic hyperkeratosis / bullous congenital ichthyosiform erythroderma Brocq (Hum Mol Genet. 2006;15:1133, Dermatol Online J 2006;12:6); defects of CK10-CK1 protein network cause structural instability and weakness of keratinocytes, causing blistering, hyperproliferation and hyperkeratosis

CK10 is putative autoantigen in chronic, antibiotic resistant Lyme arthritis (J Immunol 2006;177:2486)

Uses:

(1) helps distinguish inflammatory linear verrucous epidermal nevus (higher CK10) from psoriasis (Eur J Dermatol 2004;14:216)

(2) increase indicates a response to treatment for psoriasis (Am Acad Dermatol 2004;51:257).

Positive staining (normal): epidermal spinous and granular cell layers

Positive staining (disease): cervical squamous cell carcinoma-keratinizing (Hum Path 2004;35:546)

References: OMIM 148080

 

Cytokeratin 11 (CK11, K11)

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Very little information is present on CK11

Uses: no significant clinical use by pathologists

Positive staining (normal): keratinizing epidermal squamous cells

 

Cytokeratin 12 (CK12, K12)

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Molecular weight is 53.5 kDa

Pairs with CK3

Maintains corneal epithelial integrity (Invest Ophthalmol Vis Sci 1996;37:2572)

Mutations cause Meesmann corneal dystrophy (Am J Hum Genet 1997;61:1268)

Uses: no significant clinical use by pathologists

Positive staining (normal): conjunctival limbic suprabasal epithelial cells and corneal basal and suprabasal layers (Invest Ophthalmol Vis Sci 2006;47:1359)

References: OMIM 601687

 

Cytokeratin 13 (CK13, K13)

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Molecular weight is 53 kDa

Pairs with CK4

Marker of mature but non-keratinized squamous epithelium

Downregulated in squamous cell carcinoma of head and neck (Oral Oncol 2005;41:183) and other sites (Virchows Arch A Pathol Anat Histopathol 1991;418:249)

Sensitive marker for retinoid bioactivity in skin warts of renal transplant recipients (Arch Dermatol 2002;138:61)

Mutation causes familial white sponge nevus (J Dent Res 2001;80:919)

Cable piliated Burkholderia cepacia binds to cytokeratin 13 of epithelial cells (Infect Immun 2000;68:1787)

Uses: no significant clinical use by pathologists

Positive staining (normal): suprabasal layers of non-cornified stratified epithelium, including squamous (non-keratinized) epithelia of cervix, esophagus, larynx, oral cavity, tonsils, urothelium, and respiratory-type epithelium

Positive staining (disease): Brenner tumor, squamous metaplasia, squamous cell carcinoma (10%), urothelial carcinoma (well differentiated)

Negative staining: epidermis

References: OMIM 148065, Gene 1998;215:269

 

Cytokeratin 14 (CK14, K14)

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Molecular weight of 50 kDa

Partner is CK5

May be detected by cytokeratin 34BE12

CK5/6+ or CK14+ tumors define a basal subtype of DCIS (Mod Path 2006;19:1506) or invasive breast carcinoma; represents 9% of sporadic invasive ductal breast cancers, ER-, PR-, HER2-, high grade, poor prognosis (Mod Path 2005;18:1321, Eur J Cancer 2006;42:3149 but see Clin Cancer Res 2004;10:5988-not poor prognosis), associated with BRCA1 (Clin Cancer Res 2005;11:5175)

In cervix, loss of expression is associated with high grade SIL and high risk HPV (Hum Path 2001;32:1351)

Prostate tumors with distinct basal cells on H&E that are negative for 34BE12 are also negative for CK14 (Pathol Res Pract 2006;202:651

Mutations cause epidermolysis bullosa simplex (J Invest Dermatol 2006;126:773), Naegeli syndrome / dermatopathia pigmentosa reticularis  (no fingerprints, OMIM 161000)

Uses:

(1) distinguish parathyroid oxyphil adenoma (CK14+) from carcinoma (CK14-, AJSP 2002;26:344)

(2) distinguish breast papilloma (stronger and more diffuse CK14 staining) from papillary DCIS (AJSP 2005;29:625)

(3) distinguish sinonasal squamous cell carcinoma (poorly differentiated or nonkeratinizing, both CK14+) from sinonasal undifferentiated carcinoma or nasopharyngeal carcinoma (CK14-, AJSP 2002;26:1597)

Positive staining (normal): hair follicles (Br J Dermatol 2004;150:860), basal keratinocytes in stratified epithelium (various tissue/organs), myoepithelial cells (breast and salivary gland), thyroid oncocytes

Positive staining (not carcinoma): breast papilloma (see above), odontogenic neoplasms (Oral Dis 2003;9:1), parathyroid oxyphil adenoma (see above), pseudoepitheliomatous hyperplasia-spinous and superficial layers of oral mucosa with paracoccidioidomycosis (Med Mycol 2006;44:399), renal and other oncocytoma (Histopathology 2001;39:455), thymoma, trichoblastoma

Positive staining (carcinoma): basal cell (Am J Dermatopathol 2001;23:501), breast-basal phenotype (see above), salivary gland tumors except acinic cell carcinoma (Pathologica 2006;98:147), squamous cell carcinoma (esophagus-Nepal Med Coll J 2006;8:75 and other sites-Histopathology 2001;39:9), squamous differentiation in urothelial (J Clin Pathol 1997;50:1032) and other tumors

Negative staining: normal oral mucosa, most renal cell carcinomas

Micro images: breast-normal; breast carcinoma #1 is CK14+ (fig C); gallbladder adenosquamous carcinomaskin-normal #1#2skin in epidermolysis bullosa simplex patientssquamous cell carcinoma #1-oral (fig e/f)mesotheliomasquamoid areas are CK14+ in urothelial carcinoma

References: OMIM 148066

 

Cytokeratin 15 (CK15, K15)

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Molecular weight of 50 kDa (HopkinsMedicine)

Downregulated in activated keratinocytes in psoriasis, hypertrophic scars and skin injury (J Invest Dermatol 1999;112:362, Exp Cell Res 2000;254:80

Uses: no significant clinical use by pathologists

Positive staining (normal): conjunctiva (basal cells) and cornea limbus epithelial cells (basal and suprabasal cells, Invest Ophthalmol Vis Sci 2006;47:4780), fetal epidermis and nail, hair follicle bulge and follicular stem cells (Clin Exp Dermatol 2006;31:807), oral mucosa, skin-deep rete ridges (Differentiation 2004;72:387, stratified epithelium-basal regions (cervix-Am J Pathol 1993;142:403, esophagus-Mol Cell Biol 2004;24:3168)

Positive staining (disease): Paget’s disease-extramammary (small, compressed keratinocytes, Histopathology 2006;48:723), sebaceomas (J Cutan Pathol 2006;33:634), trichoepithelioma (63-100%, Eur J Dermatol 1999;9:363, J Cutan Pathol 1999;26:113)

Negative staining: cornea (central), sebaceous carcinomas and sebaceous neoplasms in Muir-Torre syndrome

Micro images: skin (external root sheath)skin (K15 in red)various epithelia

References: OMIM 148030

 

Cytokeratin 16 (CK16, K16)

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Molecular weight of 48 kDa (HopkinsMedicine)

Paired with keratin 6

Activated keratinocytes produce keratin 6, 16, 17, not normally present (Am J Pathol 1998;152:1133)

Upregulated in benign keratinocyte hyperplasia, including psoriasis; prepsoriatic skin may be converted to a distinct adult tissue type resembling hard palate (J Investig Dermatol Symp Proc 2006;11:16)

Also upregulated in stress incontinence in periurethral vaginal wall (Hum Reprod 2006;21:22), conjunctival epithelium in Sjogren’s syndrome (Exp Eye Res 2003;77:17)

Downregulated in cervical squamous carcinoma (Virology 2005;331:269)

Mutations are associated with pachyonychia congenita (Nat Genet 1995;9:273) and focal non-epidermolytic palmoplantar keratoderma (Hum Mol Genet 1995;4:1875)

Uses: no significant clinical use by pathologists

Positive staining (normal): hair, nail and glands of epidermis; melanocytes (Am J Dermatopathol 2005;27:476); esophagus

Positive staining (disease): keratoderma of the palms (strong, Acta Dermatovenerol Croat 2005;13:206), skin damage (suprabasal keratinocytes), tympanic membrane-annular region (Acta Otolaryngol 1993;113:345)

Positive staining (carcinoma): breast-invasive (10%, Am J Pathol 1991;138:751), squamous cell carcinoma in situ of skin-clear cell type (J Cutan Pathol 2007;34:226),

Negative staining: normal breast

Micro images: oral cavity (normal)

References: OMIM 148067

 

Cytokeratin 17 (CK17, K17)

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Molecular weight of 48 kDa

Basal type cytokeratin (also 34betaE12, CK5/6, CK14) of complex epithelia but not in stratified or simple epithelia (Eur J Cell Biol 1992;59:127)

Rapidly induced in wounded stratified epithelia (also CK 6, CK16); regulates cell growth through binding to the adaptor protein 14-3-3sigma (Nature 2006;441:362)

Mutations cause pachyonychia congenita type 2 (J Dermatol 2006;33:161) or steatocystoma multiplex (Br J Dermatol 1998;139:475)

Uses:

(1) distinguish pancreatobiliary adenocarcinoma (CK17+) from extra-pancreatobiliary nonmucinous adenocarcinoma (CK17-, AJSP 2005;29:359)

(2) distinguish cholangiocarcinoma (60% are CK17+) from hepatocellular carcinoma (CK17-, J Gastrointestin Liver Dis 2006;15:9)

(3) distinguish renal urothelial carcinoma (CK5/CK6+, CK17+, vimentin-) from collecting duct carcinoma (CK5/CK6-, CK17-, vimentin+, AJSP 2005;29:747)

(4) considered a marker of or associated with the basal phenotype (also CK 5/6, CK 14) of invasive or in situ ductal carcinoma of breast (Mod Path 2006;19:1506)

(5) sensitive marker of sentinel nodal metastases by RT-PCR in oral squamous cell carcinoma (Clin Cancer Res 2006;12:2498)

Positive staining (normal): basal cells of complex epithelia, breast myoepithelial cells (references above), cervical reserve and immature metaplastic cells (Cancer 1999;87:87), hair shaft epithelia (Am J Dermatopathol 1997;19:335), nail beds (NCBI), sebaceous glands (Oncol Rep 2006;16:295), urothelial metaplasia (Int J Gynecol Pathol 1999;18:125)

Positive staining (carcinoma): basal cell of skin (J Dermatol Sci 1998;17:15), breast (references above), cervical (J Clin Pathol 1999;52:41), cervical squamous intraepithelial lesions (Cancer 1999;87:87), cholangiocarcinoma (intrahepatic, Pathologe 2006;27:244), laryngeal premalignant changes or squamous cell carcinoma (Ann Otol Rhinol Laryngol 2004;113:821), pancreatobiliary (AJCP 2001;115:695), squamous cell of head and neck (Anticancer Res 2005;25:2675), thyroid (Hum Path 1999;30:1166), urothelial (references above)

Negative staining: gastric adenocarcinoma (Hum Path 2004;35:576)

Micro images: breast myoepithelial hyperplasia (fig 1j)squamous cell carcinoma

References: OMIM 148069

 

Cytokeratin 18 (CK18, K18)

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Molecular weight is 45 kDa (HopkinsMedicine)

Pairs with CK8

Ethanol causes CK8/18+ Mallory body like inclusions by (a) causing oxidative stress, which (b) inhibits proteasomes that normally remove ubiquinated cytokeratins, which (c) causes accumulation of ubiquinated cytokeratins (Exp Mol Pathol 2006;81:191)

Various CK8/CK18 mutations may increase susceptibility to liver disease (Gastroenterology 2005;129:885) including cryptogenic cirrhosis (J Clin Invest 1997;99:19)

Is a marker of fetal mid-face (primary palate) growth and fusion (J Dent Res 2005;84:69)

Interacts with enteropathogenic E. coli secreted protein F (EspF) and is redistributed after infection (Cell Microbiol 2004;6:987)

In Chagas’ disease, FLY domain on surface of trypomastigotes binds to CK18, promotes its reorganization and causes increase in number of parasites/cell (Exp Cell Res 2007;313:210, J Biol Chem 2001;276:19382)

Interacts strongly with HPV16 E1=E4 protein (J Virol 2004;78:821)

Uses:

(1) serum tumor marker for breast cancer (AJCP 2005;123:66) and T3/T4 bladder carcinoma (Clin Biochem 2002;35:327)

(2) an airway epithelial cell autoantigen associated with nonallergic asthma; a possible serum marker (also CK19) for toluene diisocyanate-induced asthma among exposed workers (Yonsei Med J 2006;47:773)

(3) RT-PCR to assess sentinel lymph nodes in colon carcinoma (Scand J Gastroenterol 2006;41:1073) and lymph nodes of gastric carcinoma (World J Gastroenterol 2005;11:6530)

(4) loss of expression in breast carcinoma may be a poor prognostic factor (Clin Cancer Res 2004;10:2670)

(5) cleaved cytokeratin-18 is a marker of apoptosis (J Histochem Cytochem 2005;53:229, Oncoserve online)

 

Cytokeratin 18 (continued)

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Positive staining (normal): simple (i.e. non stratified) epithelial cells, eccrine glands (J Cutan Pathol 2007;34:226), endothelium of veins, venules and lymphatics (Hum Path 2000;31:1062), trophoblast (Archives 2002;126:1480)

Positive staining (not carcinoma): ameloblastoma-peripheral (Oral Diseases-OnlineEarly Articles), breast (references above), chordoma (56%, Mod Path 1997;10:545), endothelium of synovial tissue with rheumatic disease (Br J Rheumatol 1993;32:676), epithelioid hemangioendothelioma (100%) and angiosarcoma (epithelioid-50%, nonepithelioid-20%, Hum Path 2000;31:1062), hepatoblastoma (epithelial areas, Pediatr Dev Pathol 2006;9:196), hepatoid adenocarcinoma (AJSP 2003;27:1302), inflammatory myofibroblastic tumor (AJSP 2006;30:1502), Mallory bodies (J Cell Biol 2005;171:931), papillary tumor of pineal region (J Neuropathol Exp Neurol 2006;65:1004), urothelial metaplasia (Int J Gynecol Pathol 1999;18:125)

Positive staining (carcinoma): adenocarcinoma (various), gastric (Hum Path 2004;35:576), hepatocellular (including imprints in 83%, Acta Cytol 2007;51:61), large cell neuroendocrine (AJCP 2006;125:682),

Negative staining: squamous cell carcinoma (Histopathology 1993;23:45)

Micro images: breast-infiltrating ductal carcinoma #1#2choroid plexus papillomacolon (normal)liver and bile ducts are CK18+neuroendocrine carcinoma (unknown site)placentabreast and lung carcinoma and normal prostate

Contributed by Leica Microsystems, Biosystems Division - colon (normal)-Cytokeratin 8/18 (5D3) with intense cytoplasmic and membranous staining

References: OMIM 148070

 

Cytokeratin 19 (CK19, K19)

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Molecular weight is 40 kDa (smallest cytokeratin)

Often coexpressed with CK7

Present in both simple and complex epithelium

Involved in the organization of myofibers; links contractile apparatus to dystrophin at costameres of striated muscle (also CK8, Mol Biol Cell 2005;16:4280)

Polymorphisms of CK19 pseudogene are associated with primary biliary cirrhosis (Hepatol Res 2003;25:281)

Uses:

(1) confirm diagnosis of papillary thyroid carcinoma in cytology or equivocal cases (Archives 2003;127:579, Mod Path 2006;19:1631); help distinguish follicular variant of papillary thyroid carcinoma (CK19+) from (a) follicular adenoma (CK19-, Endocr Pathol 2006;17:213, AJCP 2006;126:700 but see AJCP 2001;116:696), (b) hyalinizing trabecular adenoma (CK19-, AJSP 2006;30:1269), (c) Grave’s disease (weak/negative CK19, Endocr Pathol 2005;16:63), (d) multinodular goiter with papillary areas (Endocr Pathol 2002;13:207); note that CK19 may stain benign thyroid lesions

(2) distinguish hepatocellular carcinoma (CK19-) from either hepatoid adenocarcinoma metastatic to liver (CK19+, AJSP 2003;27:1302) or cholangiocarcinoma (CK19+, J Gastrointestin Liver Dis 2006;15:9, AJCP 2006;125:519)

(3) distinguish chordoma (CK19+) from parachordoma (CK19-, Ann Diagn Pathol 1997;1:3)

(4) poor prognostic factor in pancreatic endocrine neoplasms (AJSP 2004;28:1145, AJSP 2006;30:1588), hepatocellular carcinoma (Histopathology 2006;49:138, Cancer Sci 2003;94:851)

(5) presence of CK19+ peripheral blood tumor cells or CK19+ fragments is a poor prognostic factor for breast cancer (predicts CNS relapse, Breast Cancer Res 2006;8:R36), non-small cell lung carcinoma (Ann N Y Acad Sci 2006;1075:244, Cancer 2006;107:2842)

(6) RT-PCR detects nodal and marrow metastases in various carcinomas - bladder carcinoma (poorer survival, Clin Cancer Res 2005;11:3773), breast (Anticancer Res 2006;26:3855, Jpn J Clin Oncol 2003;33:167), gastric (World J Gastroenterol 2006;12:5219), head and neck squamous cell (Br J Cancer 2006;94:1164), skin (Br J Dermatol 2003;149:998); note that pelvic lymph nodes may have false positives (Int J Cancer 2007;120:1842)

(7) RT-PCR detects peripheral blood tumor cells in carcinoma of cervix (Gynecol Oncol 2002;85:148), colon (Gut 2002;50:530), gallbladder (Rev Med Chil 2004;132:1489), pancreatic carcinoma (World J Gastroenterol 2007;13:257); the significance of these tumor cells is unclear (Ann Oncol 2005;16:1845)

 

Cytokeratin 19 (continued)

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(8) possible urine screening test for bladder carcinoma (J Egypt Natl Canc Inst 2006;18:82)

(9) an airway epithelial cell autoantigen associated with nonallergic asthma; a possible serum marker (also CK18) for toluene diisocyanate-induced asthma among exposed workers (Yonsei Med J 2006;47:773)

Positive staining (normal): anal transition zone (Histopathology 1995;26:39), bile ducts and ductules, breast (ductal and secretory cells), colon, conjunctiva (Invest Ophthalmol Vis Sci 2006;47:4780), GI epithelium, hair follicles (J Invest Dermatol 1989;92:707), muscle fibers, myoepithelium, nipple epidermis, pancreatic ducts (Pancreas 2005;30:158), salivary gland acini (Res Commun Mol Pathol Pharmacol 1998;101:115), squamous epithelium (basal layers, BMC Cancer 2006;6:10), sweat glands, umbilical cord, urothelium

Positive staining (not carcinoma): adamantinoma (Pathol Int 2000;50:801), ameloblastoma (stellate reticulum-like areas, Bull Tokyo Dent Coll 2002;43:13), cholesteatoma (Histol Histopathol 2007;22:37), chordoma (references above), hepatoblastoma (embryonal subtype, Pediatr Dev Pathol 2006;9:196), oral dysplasia (Zhonghua Kou Qiang Yi Xue Za Zhi 2002;37:187), posterior polymorphous corneal dystrophy (Exp Eye Res 2007;84:680), pulmonary interstitial pneumonia-hyaline membranes (some, Pathology 2003;35:120), synovial sarcoma (Histopathology 1998;33:501), syringocystadenoma papilliferum of skin (Br J Dermatol 2002;147:936)

Positive staining (carcinoma): anal (Virchows Arch 2001;439:782), breast (Med Mol Morphol 2006;39:8), cholangiocarcinoma (references above), endometrial (Gynecol Oncol 2006;100:355), hepatoid adenocarcinoma (references above), lung (Histopathology 2004;45:125), Paget’s disease (extramammary, Histopathology 2006;48:723), pancreatic ductal (references above), renal cell (collecting duct-Appl Immunohistochem Mol Morphol 2002;10:332, mucinous & tubular spindle cell-Virchows Arch 2005;447:978, medullary, papillary, tubulocystic and urothelial-AJSP 2005;29:747), squamous cell (various sites-Histopathology 1993;23:45), thyroid papillary (references above)

Negative stains: cornea (Cornea 2003;22:533), hepatocytes (Hepatology 1996;23:476), hepatocellular carcinoma (usually), pancreatic islets, parachordoma, thyroid hyalinizing trabecular adenoma, trichilemmoma (Br J Dermatol 2003;149:99)

Micro images: ameloblastoma (various images); cholangiocarcinoma with lymphoepithelioma-like componentclear cell odontogenic carcinoma (fig 7b)colonic adenomcarcinomaendolymphatic sac tumorpancreatic ductal carcinoma (fig D); renal low grade tubular-mucinous neoplasm;  squamous cell carcinoma-oral (fig b)stomach-complete intestinal metaplasiathyroid papillary carcinoma #1#2-follicular variant (fig d)thyroid lesions-variousthyroid nodular goiter has focal CK19+ (fig i)

References: OMIM 148020, UniProtKB


Cytokeratin 21 (CK21, K21)

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Present in brown rats, not humans

 

Cytokeratin 22 (CK22, K22)

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No information is available as of Apr07

 

Cytokeratin 23 (CK23, K23)

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Molecular weight of 48 kDa

Minimal information is available as of Apr07

Uses: no significant clinical use by pathologists

Positive staining (normal): cornea of mice (Eur J Cell Biol 2006;85:803)

Positive staining (disease): pancreatic carcinoma (Genes Chromosomes Cancer 2001;30:123)

References: OMIM 606194

 

Cytokeratin 24 (CK24, K24)

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Molecular weight of 55 kDa (predicted)

Minimal information is available as of Apr07

Uses: no significant clinical use by pathologists

Positive staining (normal): keratinocytes, colon, placenta, spleen; less expression in thymus and testis (J Invest Dermatol 2002;119:692)

References: OMIM 607742


Cytokeratin 35 beta H11

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One of several possible clones for CK8

An antibody to low molecular weight (LMW) cytokeratins - more commonly used LMW antibodies are CAM 5.2, CK8 and AE1

Uses (for this clone):

(1) to distinguish sebaceous carcinoma (35 beta H11+) from squamous cell or basal cell carcinoma (35 beta H11 neg, Pathol Res Pract 1993;189:888)

(2) to distinguish choroid plexus papilloma (35 beta H11+) from choroid plexus carcinoma (35 beta H11 neg, Arq Neuropsiquiatr 2004;62:600)

Positive staining (normal): prostate luminal cells (Virchows Arch A Pathol Anat Histopathol 1992;421:157), skin-sebaceous glands (J Dermatol 1994;21:553), skin-sweat glands (Arch Dermatol Res 1993;285:6)

Positive staining (carcinoma): non-squamous carcinomas including cervical adenocarcinoma (Am J Obstet Gynecol 1992;166:1655), Paget’s cells (Gynecol Oncol 1992;46:216), prostate (Virchows Arch A Pathol Anat Histopathol 1992;421:157), sebaceous carcinoma (references above)

Negative staining: basal cell and squamous cell carcinoma (references above)

 

Cytokeratin AE1

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Usually used in a cytokeratin cocktail with AE3 (see AE1-AE3)

Detects high molecular weight CK10, 14, 15 and CK16 and low molecular weight CK19; these are acidic (type I) cytokeratins

Uses: highlight bile ducts in liver transplant rejection, particularly if inflammation present (J Clin Pathol 1994;47:303)

Positive staining (normal): most epithelium; including bile ducts, bronchial gland secretory cells (Histol Histopathol 2005;20:865)

Positive staining (disease): most carcinomas, including biliary tumors (benign or malignant, AJSP 1988;12:187); also mesothelioma (AJCP 1987;88:610)

Negative staining: adrenocortical carcinoma, basal cell carcinoma, hepatocytes, hepatocellular carcinoma (AJCP 1985;84:697)

Micro images: breast adenomyoepithelioma #1 (glandular cells are AE1+, myoepithelial cells are negative)liver-bile ducts in severe acute rejection with dense lymphoid infiltrate: H&E (top), AE1 (bottom)liver-bile ducts in chronic rejection #1 with dense lymphoid infiltrate: H&E (top), AE1 (bottom)#2

References: J Cell Biol 1984;98:1388, J Cell Biol 1982;95:580

 

Cytokeratin AE3

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Often used in a cytokeratin cocktail with AE1 (see AE1-AE3)

Detects high molecular weight CK1, 2, 3, 4, 5 and CK6 and low molecular weight CK7 and CK8; these are basic (type II) cytokeratins

Often considered a high molecular weight antibody (CK1-CK6 are high molecular weight, CK7-CK8 are low molecular weight)

Another high molecular weight keratin is 34 beta E12

Caution: AE3 is also the name of a chloride/bicarbonate anion exchanger (Biochem J 2003;371:687)

Positive staining (normal): most epithelium; also nodal reticulum cells (Archives 2002;126:248)

Positive staining (disease): most carcinomas; also adrenocortical oncocytoma (AJSP 1998;22:603, lichen amyloidosus and macular amyloidosis (J Eur Acad Dermatol Venereol 2004;18:305), pterygium (Yan Ke Xue Bao 2000;16:48)

Micro images: nodal reticulum cells

References: J Cell Biol 1984;98:1388, J Cell Biol 1982;95:580


Cytokeratin KL-1

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Broad spectrum keratin antibody for CK1-4, 10-11 (Jpn J Clin Oncol 1998;28:480) or CK1, 2, 5-8, 11, 14, 16-18 (Abcam)

Not used as frequently as AE1-AE3

Uses:

(1) detect tumor cells in bone marrow (Jpn J Clin Oncol 1998;28:480)

(2) detect micrometastases in lymph nodes (Mod Path 2002;15:641, free full text)

(2) label tumor cells for flow cytometry from archival specimens (AJCP 1998;110:227)

Positive staining (normal): most epithelium (J Invest Dermatol 1983;81:351)

Positive staining (disease): most carcinomas; also craniopharyngioma (Acta Neurochir (Wien) 2001;143:147), liver epithelial neoplasms (Am J Pathol 1987;127:530)

Micro images: breast carcinoma metastases to axillary nodes

 

Cytokeratin MNF 116

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Broad-spectrum cytokeratin marker which stains high and low molecular weight cytokeratins (CK 5, 6, 8, 17 and probably 19)

Uses:

(1) detect micrometastases in lymph nodes (BJU Int 2006;98:70)

(2) detect positive margins in Mohs’ surgery (Dermatol Surg 2003;29:375)

(3) double immunostaining with laminin or collagen type IV is useful to detect microinvasion in VIN or CIN (Archives 2005;129:747)

Positive stains (normal): most epithelial cells, including lung type II epithelial cells (Am J Respir Cell Mol Biol 1998;18:786), trophoblast (Acta Obstet Gynecol Scand 2003;82:722), uterine smooth muscle (Histopathology 1995;27:407)

Positive stains (disease): most carcinomas (J Histochem Cytochem 2001;49:1369), mesothelioma (Am J Dermatopathol 1997;19:261), pituitary adenoma (Eur J Endocrinol 2003;148:357)

Negative stains: myofibroblastic tumors (or weak, J Cutan Pathol 2003;30:393)

Micro images: adenocarcinoma-pleural effusionanaplastic thyroid carcinoma is MNF116+ (fig A)breast-infiltrating ductal carcinomacarcinoma in situ and invasive (various)-double immunostaining with collagen type IV #1#2cardiac myxoma with glandular differentiationprimary cutaneous localized amyloidosis: MNF 116 stains the amyloid (fig 3)


Cytomegalovirus (CMV)

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Micro images: lung transplantation patient with CMV mimicking carcinoma (fig 5/6)

Micro images: Contributed by Leica Microsystems, Biosystems Division - placenta-CMV early gene RNA using probe (PB0614)-in situ hybridization


DCC

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Tumor suppressor gene at 18q; “Deleted in Colon Cancer”

Related structurally to cell adhesion molecules

Important prognostic marker in stage II colon cancer


Desmogleins

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Constituents of desmosomes that anchor intermediate filaments

Autoantibodies to desmoglein-3 cause pemphigus vulgaris

Autoantibodies to desmoglein-1 cause pemphigus foliaceus (more superficial)


DOPA reaction

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For melanocytic cells

Presence of tyrosinase is determine by deposition of brown pigment

 

DPC4

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Also called MADH4, SMAD4

Tumor suppressor gene on 18q21.1 that mediates the downstream effect of the TGF-beta superfamily signaling, resulting in growth inhibition and apoptosis

Inactivation relatively specific for pancreatic adenocarcinoma, but only 55% sensitive in usual pancreatic ductal adenocarcinomas and 34% sensitive in ampullary carcinoma; may not be inactivated in IPMN associated colloid carcinoma (Mod Path 2005;18:1034)

Mutations in 20% of colorectal carcinomas

Interpretation: staining is primarily cytoplasmic; adjacent pancreatic stroma also stains in benign and malignant mucinous cystic neoplasms

Use: loss of expression specific for pancreatic malignancy (in-situ or invasive) vs. benign process, particularly helpful in biopsies (AJCP 2001;116:831); expression in PanIN may predict its expression in a subsequent invasive ductal adenocarcinoma, and distinguish recurrent or persistent adenocarcinoma from a second primary adenocarcinoma, Hum Path 2001; 32:638

Positive staining (normal): normal pancreatic ducts, islets and acini;

Positive staining (tumor): carcinoma in situ in mucinous cystic neoplasms

Negative staining: invasive mucinous cystic neoplasms (AJSP 2000;24:1544), some in-situ and invasive pancreatic adenocarcinomas

Micro images: DPC4 staining in invasive ampullary carcinoma and high grade dysplasia;

Micro images: staining in pancreatic lesions - PANIN, invasive disease, IPMN


E1AF

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Gene at 17q12 translocated in Ewing’s sarcoma/PNET

 

E2A

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Transcriptional factor at 19p13.3 that binds DNA

 

E2A- PBX1

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Fusion protein found in 25% of early pre-B ALL, 5-7% of pediatric ALL via t(1;19)(q23;p13)

N terminal of protein has E2A, C terminal has PBX-1

Transcriptional transactivator; precise mechanism not known

Poor prognostic factor in childhood ALL, although some t(1;19) translocations in pediatric ALL lack E2A-PBX1 expression and have better prognosis

Associated with L1 subtype of ALL; positive for CD9, CD10, CD19

 

EBER1 and EBER2

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EBV encoded RNA; nuclear RNA portions of EBER 1 and 2 genes

Interpretation: nuclear stain

Micro images: Contributed by Leica Microsystems, Biosystems Division - Hodgkin’s lymphoma-in situ hybridization using EBER probe (PB0589)

 

E-cadherin

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Calcium-dependent transmembrane epithelial protein that promotes intercellular adhesion molecule

Its loss is associated with invasive carcinoma

Tumor suppressor gene CDH1 is at 16q22.1

Abnormal function in carcinomas may facilitate cellular detachment leading to metastasis

Interpretation: normal pattern is membranous staining

Uses: distinguish LCIS from DCIS in indeterminate cases (AJSP 2001;25:229)

Bladder: Reduced expression in invasive bladder carcinoma

Breast cancer: Absent expression in lobular carcinoma and LCIS; reduced expression in ductal carcinoma; positive expression in small cell carcinoma (AJSP 2001; 2001;25:831) and DCIS (AJSP 2001;25:229)

Stomach: signet ring carcinomas negative for E-cadherin expression

Colonic adenocarcinoma: Diminished membranous staining compared to adenomas with misplaced epithelium (AJSP 2002;26:206)

Micro images: Paget’s disease of breast - Paget cells are CK7+, E-cadherin negative; inflammatory carcinoma of breast - A: tumor emboli in dermal lymphatic; B: membranous E cadherin staining; (2) A: inflammatory carcinoma with lobular histology (H&E); B: membranous E cadherin staining

 

EGFR

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Epidermal Growth Factor Receptor; also called HER1, c-erb-B1; on 7p

Member of epidermal growth factor receptor family (also HER2)

170 kDa transmembrane receptor that induces tyrosine kinase activity affecting cell growth

Activated by epidermal growth factor and transforming growth factor alpha

Lung adenocarcinoma patients with specific mutations may have clinical response to gefitinib (targets EGFR kinase)

Brain: amplification is favorable prognostic factor in glioblastoma multiforme (Archives 2005;129:624)

Breast: 6% of breast carcinomas show EGFR amplification (7-18 copies) associated with EGRF protein overexpression but not HER2 status; patients may be responsive to EGFR therapy (Mod Path 2005;18:1027)

Colon: present in 60-80% of colorectal carcinomas, but these tumors lack gene amplification (Mod Path 2005;18:1350), and patients don’t respond to gefitinib

Lung: mutations are associated with terminal respiratory unit type adenocarcinoma of lung (AJSP 2005;29:633); EGRF tyrosine kinase inhibitors (gefitinib) show rapid clinical response in 10% of lung cancer patients

Positive staining (normal): endometrial stromal cells

Positive staining (disease): endometrial stromal sarcoma (AJSP 2005;29:485); also adenosarcoma, MMMT, squamous cell carcinoma of lung, 80% of non-small cell lung cancers

Micro images: amplification by FISH in glioblastoma multiformeimmunostains and amplification in breast carcinoma; immunostaining in colorectal carcinoma; chromogenic in situ hybridization in colorectal carcinoma

 

Elastic fibers

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Also called Verfoeff-van Gieson

Stains elastic fibers black

Outlines elastic lamina of muscular arteries and media of aorta

Background is trichrome

Micro images: normal aorta, media with parallel elastic fibers, van Gieson stain;

angiolymphatic invasion in infiltrating ductal carcinoma of breast; not angiolymphatic invasion


Elongin

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Transcription elongation factor; negatively regulated by von Hippel Lindau protein

Increases rate of elongation by suppressing RNA polymerase pausing

Heterotrimer of A, B and C subunits

VHL product competes with subunit A for binding with BC, causing more "pausing", less transcription

A: catalytic subunit of ABC complex; competes with VHL for binding of Elongin (homologous coding region)

B: positive regulator of Elongin

C: positive regulator of Elongin; similar to E. coli termination factor Rho's RNA binding region, so binding of nascent RNA may be important

 

Endothelin-1

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Vasoconstrictor protein associated with hypertension in African-Americans


Epstein Barr Virus

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See also EBER1 above

Strongly associated with sinonasal (NK) lymphomas

Associated with monoclonal B cell lymphoproliferative disorder (high grade) and immunosuppression (methotrexate) for autoimmune disease

Expresses LMP1, which prevents apoptosis via bcl2 interaction

Expresses EBER1, which transactivates host genes


ERCC1

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Excision Repair Cross-Complementation group 1

DNA repair gene

Genetic polymorphisms may affect patient response to platinum-based chemotherapy in non-small cell lung carcinoma (Clin Lung Cancer 2009;10:118, Clin Cancer Res 2004;10:4939, Eur J Cardiothorac Surg 2008;33:805)

Diagrams: nucleotide excision repair


Estrogen receptor

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Two subtypes: ER-alpha and ER-beta

ER-alpha: “classic” functions of ER; may render breast epithelium susceptible to proliferative stimulation of estrogen; expressed in breast and endometrium

ER-beta: “housekeeping” functions; expressed in normal ovary and granulosa cells; carcinoma of breast, colon, prostate

Both alpha and beta share highly conserved DNA binding domain and commonly interact with estrogen-regulating factors, but may affect different genes

Presence of estrogen (type alpha) and progesterone receptors correlates best with response to anti-estrogen treatment (tamoxifen or others) or chemotherapy, only weakly with prognosis; presence is associated with better differentiated tumors, older age

Evaluate % of tumor nuclei stained and intensity of staining (none, weak, moderate, strong)

Immunostaining now done on paraffin fixed tissue (previously required fresh tissue)

Metastases to skin are often positive for androgen receptor, even if ER-, PR- (Mod Path 2000;13:119)

Antigen retrieval techniques are required for ER if glyoxal fixative is used (Hum Path 2004;35:1058)

Compared to ER, PR staining adds only a limited amount of additional predictive information for response to hormonal therapy (Mod Path 2004;17:1545)

Interpretation: nuclear stain; cytoplasmic staining only is a negative result

Uses: (1) in breast cancer, predicts response to tamoxifen or other anti-estrogens; also prognostic marker for survival (ER+ is favorable); (2) relatively specific for breast origin (but numerous exceptions); (3) distinguishes endocervical (ER-) from endometrial (ER+) adenocarcinomas (AJSP 2002;26:998)

Positive staining (disease): breast carcinoma (varies by subtype and tumor grade); endometrial adenocarcinoma (75%); ovarian serous, mucinous and endometrioid adenocarcinoma (AJSP 2001;25:667), papillary urothelial carcinoma of bladder (10-20%) and ovarian transitional cell carcinoma (90%, Archives 2005;129:194)

Negative staining: endocervical adenocarcinoma, ovarian clear cell carcinoma

Micro images: peritoneal fluid from metastatic lobular carcinoma of breast with intraperitoneal carcinomatosis (fig 3); papillary urothelial carcinoma of bladder (fig 3), ovarian transitional cell carcinoma (fig 6); breast carcinoma metastatic to stomach: ER+ (fig 3a), PR+ (3b); GCDFP-15+ (3c); colloid carcinoma of breast - ER+, PR+, chromogranin+, synaptophysin+DCIS with ER and HER2 double immunostaining

Contributed by Leica Microsystems, Biosystems Division - invasive ductal carcinoma-ER (6F11) with intense nuclear staining

References: Hum Path 2001;32:113 (ER type beta), Cancer Res 2002;62:4849 (ER beta cx, a splice variant)

 

ets-1

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Proto-oncogene at 11q23-24, Also called v-ets

Member of Erythroblastosis virus association Transforming Sequence family of DNA binding transcription factors, all with a common 84 amino acid sequence called Ets domain; also a specific transcription factor

Activates transcription of urokinase-plasminogen activator, MMP-1, MMP-3, MMP-9, all associated with metastases

Present in both tumor and stromal cells

Expression induced by acidic and basic vascular endothelial growth factor, vascular endothelial growth factor, epidermal growth factor

Ovary: mRNA expression in solid ovarian carcinomas and effusions of serous ovarian carcinoma is poor prognostic marker, AJSP 2001;25:1493


ETV1

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Gene at 7p22 translocated in Ewing’s sarcoma/PNET; overexpressed in chronic myeloid leukemia and acute myeloid leukemia transformed from myelodysplastic syndrome


EWS

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At 22q12

Translocations:

t(9;22)(q22;q12) with TEC gene on #9 in myxoid chondrosarcoma

t(11;22)(p13;q12) in desmoplastic small round cell tumor with WT1 gene on #11

t(11;22)(q24;q12) in Ewing’s sarcoma/PNET

 

EWS/FLI-1

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Fusion protein of Ewing's sarcoma/PNET localized to nucleus, associated with t(11;22)(q24;q12)

More powerful transcription activator than normal FLI-1, can transform NIH 3T3 cells

 

EWS-WT1

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Fusion protein of desmoplastic small round cell tumor, associated with t(11;22)(p13;q12)

Fusion gene may lose the tumor suppressor effect of WT1 and gain the transactivation activity of EWS, functioning as a novel transcription factor that activates expression of target genes normally repressed by WT1, such as PDGF-A


Fascin

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55 kDa protein that forms tight and stable cytoplasmic bundles with filamentous actin

Fascin-1: most common type; present in specialized cells with extensive surfaces or migratory potential, such as neurons, glia, dendritic cells, macrophages, skeletal and smooth muscle, endothelial cells; not normal epithelial cells

Fascin-2: in retina; fascin-3: in testis

Actin-bundling protein with important role in cell motility and adhesion

Overexpression in tumors often associated with aggressive disease

Positive staining (disease): carcinoma of biliary tract, breast, colon, lung, ovary, pancreas, skin; follicular dendritic cell tumors, Hodgkin’s lymphoma-classic subtype (highly sensitive), interdigitating dendritic cell tumors Langerhans cell histiocytosis, urothelial carcinoma (noninvasive papillary or invasive)

Negative staining: normal epithelial cells, normal urothelium, benign urothelial lesions

Micro images: synovial sarcoma (positive)

References: Hum Path 2005;36:741


Ferritin

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Micro images: highly malignant adult hepatic blastoma - fig A: ferritin; B: alpha-fetoprotein; C: HepPar1; D: CK8; E: p53; F: beta-catenin


FLI-1

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Protein is member of ETS family of DNA binding transcription factors; gene is fli-1, present on #11q24

Involved in cellular proliferation, tumorigenesis, embryologic development of blood vessels

90% of Ewing’s sarcoma/primitive neuroectodermal (PNET) tumors have t(11;22)(q24;q12) which results in fusion of EWS to FLI-1

Sensitive and specific for Ewing’s sarcoma/PNET; also sensitive/specific for vascular tumors vs. sarcomas, carcinomas or melanomas (AJSP 2001;25:1061)

Interpretation: call positive if nuclear staining of 10% of tumor cells (usually is >50%) and positive internal controls of endothelial cells and small lymphocytes (AJSP 2001;25:1061)

Note: other vascular tumor markers (CD31, CD34, von Willebrand factor) are membranous or cytoplasmic stains

Note: cytoplasmic staining present in breast epithelium (benign/malignant) and cutaneous eccrine glands

Uses: differentiate Ewing’s sarcoma/PNET of kidney (positive) from blastema predominant Wilms’ tumor (negative); diagnosis of vascular tumors

Positive staining (normal): endothelial cells, T cells, small lymphocytes

Positive staining (disease): Ewing’s sarcoma/PNET, vascular tumors, lymphomas

Negative staining: blastema predominant Wilms’ tumor; carcinomas, melanomas, non-vascular sarcomas; muscle, nerve, fibroblasts


FMC7

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Late B cell differentiation marker

Positive staining: mantle cell lymphoma, hairy cell leukemia, prolymphocytic leukemia

Negative staining: Chronic lymphocytic leukemia


Fontana-Masson

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Melanin stain; difficult to interpret faint staining in sparsely positive cells

Melanin granules reduce ammonia-silver nitrate and turn black

Micro images: melanoma


Galectin-3

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Member of carbohydrate-binding protein family known as lectins

One of 14 galectins, which function as cell receptors for N-acetyl-lactosamine moieties present on most extracellular matrix components)

Also member of the beta-galactoside-binding protein family that plays an important role in cell-cell adhesion, cell-matrix interactions, macrophage activation, angiogenesis, metastasis, apoptosis

Uses: in one study, Gal-3+ with Ki-67 > 6% was associated with parathyroid carcinomas vs. adenomas (Hum Path 2005;36:908)

Positive staining (normal): endothelial cells, peripheral nerve, folliculostellate cells of adenohypophysis

Positive staining (disease): tumors of thyroid, head and neck, liver, colon, prolactinomas; parathyroid carcinoma; rarely in reactive of hyperplastic parathyroid lesions

Micro images: galectin-3 staining in lung squamous and adenocarcinoma

Reference: Mod Path 2005;18:1264 (prognostic significance in lung squamous cell and adenocarcinoma)


Giemsa stain

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As a hematology stain, works best with alcohol fixed smears

As a histology stain, detects mast cells and microorganisms, such as Giardia or Helicobacter

A "Romanowsky-type" stain, composed of mixtures of methylene blue, azure, and eosin compounds

Methylene blue is a metachromatic stain, meaning that some tissue components (mast cell granules ,cartilage, mucin, amyloid) stain purple and not blue


Glial fibrillary acidic protein (GFAP)

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Intermediate filament for astrocytes (normal, reactive, neoplastic)

Positive staining (disease): CNS tumors, colonic schwannoma (AJSP 2001;25:846)

Micro images: myxopapillary ependymoma of broad ligament (fig 8b)


GLUT1

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Facilitative glucose transporter; activated by hypoxia-sensing cellular pathways; may sustain cellular metabolism via glycolysis when hypoxia is present

Positive staining (normal): red blood cells, blood-brain barrier, perineurium

Positive staining (disease): various carcinomas, including fallopian tube carcinomas (Archives 2005;129:651)

Negative staining: benign epithelium


GLUT-4

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Glucose transporter 4

Highly expressed in mitochondria-rich (oxyphil) cells in normal/neoplastic tissue, including gastric parietal cells, Hashimoto thyroiditis, Hurthle cell adenomas and carcinomas, occasional oxyphil parathyroid hyperplasias, occasional oxyphil parathyroid adenomas, renal oncocytomas, salivary gland oncycytomas, Warthin tumors, hibernomas


Glycophorin A

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Also called CD235a

Positive staining: erythroid cells, AML-M6

Negative staining: AML M0-M5, M7


Glycosaminoglycans

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Heteropolysaccharides which contain an N-acetylated hexosamine in a characteristic repeating disaccharide unit involving alternate 1,4- and 1,3-linkages consisting of either N-acetylglucosamine or N-acetylgalactosamine


GMS

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Gomori methenamine silver

Special stain for detecting fungi and Pneumocystis carini

Stains cell walls and outlines these organisms; may have artefactual background staining

Micro images: Pneumocystis carinii; Cryptococcus neoformans; Coccidioides immitis; Aspergillus fumigatus


Gram stain

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Stain to detect and differentiate bacteria

Method:

Apply crystal violet, then iodine, then decolorize by alcohol/acetone, then counterstain by safranin/fuchsin

Gram positive bacteria retain the crystal violet-iodine complex after decolorization, are not counterstained, and appear purple

Gram negative bacteria have a different cell wall structure, don’t retain the crystal violet-iodine complex after decolorization, and so are counterstained by safranin/fuchsin and appear pink/red

 

Paraffin sections:

Use neutral red instead of safranin; gram negative organisms usually stain poorly because their bacterial wall lipid is removed in tissue processing

Note: with hematoxylin and eosin staining on paraffin sections, bacteria appear as blue rods or cocci regardless of gram reaction; colonies appear as fuzzy blue clusters

Rapid diagnostic strategy for bronchioalveolar lavage samples consists of Gram stain and bacterial ATP assay (Archives 2005;129:78)

Not suitable for burn wound surfaces (Archives 2003;127:1485)

 

Micro images:

Fungi - Fusarium in peritoneal fluid

Gram positive tissue sections - Bacillus anthracis in CSFLactobacillus osteomyelitismethicillin resistant Staphylococcus aureus (MRSA) pneumoniaMycobacterium abscessus (soft tissue)

References: J Clin Pathol 1979;32:187, University of Utah method, University of Nottingham method


Granzyme B

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Enzyme associated with cytotoxic T lymphocytes; induces apoptosis in target cells of  these lymphocytes


Grimelius

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Micro images: breast carcinoma - focal Grimelius+ cells in neuroendocrine DCIS; infiltrating ductal carcinoma with focal Grimelius+ cells; Grimelius stain+ colloid carcinoma #1; #2


Hales colloidal iron

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Kidney tumors: stain must have pH between 1.5 and 2.0

Clear cell and papillary renal carcinoma have focal, coarse, droplike staining

Note: hemosiderin in any tumors will also stain positive

Uses: Helpful in distinguishing chromophobe renal cell carcinoma (intensely positive in large percentage of cells with reticular staining) from oncocytoma (usually negative; if positive - fewer cells with less intensity and dustlike staining)


HAM 56

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Stains histiocytes, endothelium, adenocarcinoma

Negative staining: osteoclast-like giant cells

Micro images: giant cell tumor of bone - mononuclear cells are positive (fig 1B); giant cell tumor of tendon sheath - mononuclear and giant cells are positive (fig 2B)


Hamartin

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Also called TSC1

On 9q34

Mutations cause tuberous sclerosis, an autosomal dominant disease beginning in infancy or early childhood with mental retardation and seizures, angiomyolipomas, subependymal giant cell tumors, cutaneous angiofibromas, cardiac rhabdomyomas, lymphangioleiomyomatosis and multifocal multinodular pneumocyte hyperplasia

Broadly expressed in many organs and tissues, including myometrium and most smooth muscle

Negative regulator of cell cycle – inhibits cell proliferation

Inactivation causes benign neoplasms in patients with tuberous sclerosis complex


Hansel stain

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Combination of eosin and methylene blue

Uses: detect eosinophiluria (eosinophils in urine) - eosinophils are bright red or pink (New Engl J Med 1986;315:1516)

More sensitive in urine than Wright’s stain (Arch Pathol Lab Med 1989;113:1256), alkaline erythrocin B or naphthalene black (Biochem Histochem 1993;68:146)

Positive staining (disease): eosinophils, usually associated with drug-induced acute interstitial nephritis, but also with eosinophilic cystitis, atheroembolic renal disease, schistosomiasis, rapidly progressive glomerulonephritis, acute prostatitis, postinfectious glomerulonephritis and acute cystitis

Micro images: image

Sources for Hansel stain testing (advertisements): Lide Labs


HBME

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Marker of mesothelial cells, named after laboratory of Dr. Hector Battifora and MEsothelioma

Also positive in various thyroid carcinomas


HHV8 / KSHV

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Human Herpes Virus 8; also known as Kaposi’s Sarcoma-associated Herpes Virus
Gamma herpesvirus identified as an etiologic agent for Kaposi’s sarcoma in 1994
Latently infects endothelial cells, monocytes and B cells in Kaposi’s sarcoma patients
Associated with 3 HIV associated lymphoproliferative disorders - primary effusion lymphoma, multicentric Castleman’s disease, multicentric Castleman’s disease-associated plasmablastic lymphoma
Sensitive but not specific for Kaposi’s sarcoma, due to presence in other tumors (including hemangiomas) in immunocompromised (may be present within intratumoral blood mononuclear cells (Mod Path 2005;18:463)
References: Am J Surg Pathol 2002;26:1363

HIV p24

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Micro images: placental staining in HIV+ mothers


HLA-G

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Non-classical MHC class I antigen that interacts with NK cells, can present nonamer peptides and binds CD8 analogous to classic HLA class 1 proteins

May play a role in maternal tolerance toward fetal tissue

Sensitive and specific for intermediate trophoblast in all types of gestational trophoblastic tissue (including tumors) in initial study, AJSP 2002;26:914

Focal staining in melanoma, renal cell carcinoma, large cell carcinoma of the lung

Negative staining: cytotrophoblast, syncytiotrophoblast


Human placental lactogen

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Also called HPL

Positive staining: placental site trophoblastic tumors, exaggerated placental sites

Negative staining: placental site nodules (or focal), epithelioid trophoblastic tumors (or focal)


ICE

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Interleukin 1 beta Converting Enzyme; related to ced-3 in C. elegans

Formed from cleavage of pro-ICE; then activates inflammatory cytokine interleukin 1 beta

Has early role is signaling pathway for Fas dependent apoptosis

Nuclear substrates: PARP, U1 RNP (U1-70 kDa), nuclear lamins, DNA dependent protein kinase

Cytoplasmic substrates: protein kinase C delta, actin / other parts of cytoskeleton

Inhibitors: p35 (baculovirus protein), CrmA (poxviral protein), aldehydes; no cellular counterparts known


Inhibin A

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Inhibin is a heterodimeric protein (with alpha and beta subunits) that inhibits or activates pituitary FSH secretion

Serum levels elevated (2x) in women with Down's fetus

Positive staining (normal): Sertoli cells (diffuse and strong), granulosa cells, prostate, brain, adrenal

Positive staining (disease): Sex-cord stromal tumors, including Sertoli cell tumors, adrenocortical tumors, placental and gestational trophoblastic lesions, granular cell tumors of gallbladder and extrahepatic bile ducts (AJSP 2001;25:1200),

some carcinomas

Negative staining: primary ovarian carcinomas (usually)

Micro images: sex cord stromal tumor; adrenocortical oncocytic carcinoma


Inhibin B

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Inhibin is a heterodimeric protein (has alpha and beta subunits) that inhibits or activates pituitary FSH secretion

High serum levels associated with granulosa cell tumors of ovary and testes


Integrins

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Family of adhesion proteins with various functions, including major cell surface receptors for extracellular matrix proteins

Membrane glycoprotein heterodimer complexes that are assembled by noncovalent association of alpha and beta subunits, with active and inactive states; currently are 18 alpha subunits and 8 beta subunits, which combine to form 24 different integrins

Alpha subunit has extracellular domain that binds matrix molecules; beta subunit has cytoplasmic domain that interacts with actin cytoskeleton, microfilament-associated proteins and signaling mediators

Functions: (a) homing of progenitor T cells to thymus, (b) differentiation and proliferation of B and T cells in bone marrow, transcription of genes involved in cell-cell contacts and endothelial cell migration

Activated by intracellular bacteria and by extracellular ligand binding

Inhibited by RGD (arginine-glycine-aspartic acid) sequence, which blocks integrins from binding to ligands

 

Integrin alpha 2b beta 3

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Also called glycoprotein IIa/IIIb, fibrinogen receptor

Platelet integrin that induces platelet aggregation

Antibodies to alpha2b beta3 prevent ischemia of percutaneous coronary angioplasty

 

Integrin alpha 3 beta 2

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Fibrinogen forms cross links with this platelet receptor during platelet aggregation

 

Integrin alpha 4 beta 1

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See CD49d

 

Integrin alpha 5 beta 1

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Also called CD29, fibronectin receptor

Supports assembly of fibronectin matrix

 

Integrin alpha 6 beta 4

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Have role in tumor cell migration and invasion in vitro

Reduced expression in invasive bladder CA

Principal ligand is laminin-5 protein (component of epithelial basement membrane)

Protein production is characteristic of basal/myoepithelial type of breast carcinoma

Beta4 subunit is only expressed in combination with alpha 6 subunit

Micro images: expression in breast carcinoma

References: Mod Path 2005;18:1165 (prognostic significance)

 

Integrin alpha v beta 3

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Specifically expressed in endothelial cells of newly formed blood vessels

May play a role in central nervous system neoplasms

Positive staining (disease): CNS tumors (particularly ependymomas, Hum Path 2005;36:665)

 

Integrin beta 2

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See CD18


Interleukins (IL)

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Soluble factors which stimulate growth-related activities of leukocytes as well as other cell types

Enhance cell proliferation and differentiation, DNA synthesis, secretion of other biologically active molecules and responses to immune and inflammatory stimuli

Promote survival of resting T cells which do not proliferate in response to IL-2, 4 or 7

IL 2, 4 and 7 receptors share a common gamma chain

 

Interleukin 2 (IL-2)

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Potent inducer of CTLA-4

Potent survival factor for lymphocytes

 

Interleukin 6 (IL-6)

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Induces thrombocytosis by stimulating thrombopoietin

Produced continuously by all mesothelioma cell lines

Micro images: IL6+ producing diffuse deciduoid peritoneal mesothelioma


Iron

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Also called hemosiderin (storage iron granules)

See also Hales colloidal iron

Perl’s method (Prussian blue stain): hydrochloric acid releases the protein bound to ferric iron, then potassium ferrocyanide binds with ferric iron to form ferric ferrocyanide, an insoluble blue compound

Hemosiderin may be present in areas of old hemorrhage or be deposited in tissues with iron overload

Hemosiderosis: stored iron does not interfere with organ function vs. hemochromatosis: iron overload associated with organ failure

Micro images: Hemosiderin, liver, iron stain


JAK

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Family whose members (JAK1-3, Tyk2) are critical for cytokine signaling

Associated with intracytoplasmic portion of cytokine receptors, which serves as docking site for STAT monomers; activated JAK activates and phosphorylates the STAT monomers, which then dissociate, dimerize and migrate to nuclear, where they interact with specific DNA binding elements and activate transcription of cyclin D1, bcl-Xl, bax, bcl2, c-myc, c-Jun, c-kit, and IL-10

Jak3: Janus kinase 3, a tyrosine kinase that activates STAT3 in response to cytokine stimulation

Positive staining (disease): ALK+ anaplastic large cell lymphoma (Hum Path 2005;36:939)

References: Archives 2005;129:990


jun

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AP-1 protein

Gene is at 1p31-32; protein product binds DNA in a complex with fos


JunB

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At 19p13

Member of Jun family of proteins (also c-Jun and JunD), that are components of AP-1 transcription factor complex, involved in cell proliferation and apoptosis

May bind with CD30 gene promoter

Interpretation: nuclear stain

Positive staining (disease): anaplastic large cell lymphoma (ALK+ or negative; cutaneous or not), classic Hodgkin’s lymphoma, CD30+ diffuse large B cell lymphoma, lymphomatoid papulosis

Negative staining: nodular lymphocyte predominant Hodgkin’s lymphoma, CD30- diffuse large cell lymphoma

Micro images: CD30+ lymphomas; classic Hodgkin’s lymphoma and anaplastic large cell lymphoma

References: Mod Path 2005;18:1365)

 

kappa

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Type of immunoglobulin light chain

Kappa/lamba ratio is usually 2:1

Restricted expression of either kappa or lambda suggests monoclonality and a neoplastic process

Micro images: primary localized laryngeal amyloidosis (kappa-left; lambda-right)

Micro images contributed by Leica Microsystems, Biosytems division: myeloma of bone marrow with in situ hybridization staining for kappa (left) and lambda (right) light chains using Kappa Probe (PB0645), Lambda Probe (PB0669) and Bond Polymer Refine Detection


lambda

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Type of immunoglobulin light chain

Kappa/lambda ratio is usually 2:1

Restricted expression of either kappa or lambda suggests monoclonality and a neoplastic process

Micro images contributed by Leica Microsystems, Biosytems division: myeloma of bone marrow with in situ hybridization staining for kappa (left) and lambda (right) light chains using Kappa Probe (PB0645), Lambda Probe (PB0669) and Bond Polymer Refine Detection
Other images: Hodgkin lymphoma-neoplastic cells have variable cytoplasmic lambda staining, plasma cells have intense staining and histiocytes have weak staining


laminin

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Major component on basement membrane, with type IV collagen

Trimeric glycoproteins (at least 11 types) with integrin binding site

Defects in laminin proteins cause skin blistering and myocardial diseases

Antibodies to laminin inhibit lung branching morphogenesis

Production of alpha-1 laminin by epithelial cells and mesenchymal cells depends on extent of mesenchymal and epithelial contact with each other; modulates mesenchymal cell shape

Uses: double immunostaining with cytokeratin is useful to detect microinvasion in VIN or CIN (Archives 2005;129:747)

Micro images: laminin5 expression in normal breast, DCIS and invasive ductal breast carcinoma


LANA

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Human herpesvirus-8 (HHV8) Latency Associated Nuclear Antigen

Highly expressed during latent HHV8 infection

Interacts with pRb, which regulates beginning of S phase of cell cycle; also inhibits p53

Presence in serum is associated with developing Kaposi’s sarcoma in immunocompromised individuals

Micro images: LANA+ Kaposi’s sarcoma

Positive staining (disease): HHV8 associated Kaposi’s sarcoma (endothelial and spindle cells, 92% sensitive and highly specific), primary effusion lymphoma, multicentric Castleman’s disease

References: Mod Path 2005;18:463 (LANA vs. HHV8 in Kaposi’s sarcoma)


Lecithin

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Major component of cell membrane, usually outer surface

composed of phosphatidylcholine (phosphocholine and diglyceride)


Lectins

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Plant-derived proteins that bind specifically to carbohydrate groups acting as lectin receptors

Ulex europeaus lectin combines with H antigen that corresponds to O blood group

 

Leder’s stain

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Type of enzyme histochemistry

Chloroacetate esterase resists effects of formalin fixation and paraffin embedding

Uses: identify mast cell disorders, myeloid disorders

Positive staining (normal): mast cells, myeloid cells


Lipochrome (lipofuscin) pigments

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Breakdown products within cells from oxidation of lipids and lipoproteins

Also called “wear-and-tear” pigments in heart, liver, CNS, adrenal cortex (zona reticularis), testis interstitium and seminal vesicle

Stains with Sudan black B, long Ziehl-Neelson acid fast, Schmorl's methods

Lipochrome may have strong orange autofluorescence in formalin-fixed, unstained paraffin sections

Micro images: Lipochrome in liver, H and E stain


LMP

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Latent Membrane Protein of EBV

Interpretation: cytoplasmic or membranous staining


Luxol fast blue

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Myelin stain

Based on strong affinity of copper phthalocyanin dye for phospholipids and choline bases of myelin


Mac 387

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Use ficin enzymatic retrieval, not heat

Positive staining: squamous mucosa; histiocytes


Martius scarlet blue trichrome

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Stains for fresh (orange-yellow), mature (red) or old (blue) fibrin

Micro images: hepatocellular carcinoma and intravascular tumor - (1) without thrombus - A: H&E; B: Martius scarlet blue; C: factor XIIIa; D: CD34; (2) with thrombus - A: H&E; B: Martius scarlet blue; C: fibrinogen; D: CD34; (3) tumor herniation into vessel wall; A: Martius scarlet blue; B: H&E


Maspin

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Tumor suppressor protein with serine protease inhibition (Serpin) activity at 18q21.3

Directly regulated by p53; inhibits tumor cell motility, invasion, metastasis and angiogenesis

Cervical squamous cell carcinoma: loss of expression from CIN 3 (HG SIL) to invasive squamous cell carcinoma (Mod Path 2005;18:1102)

Oral squamous cell carcinoma: maspin+ tumors have longer overall survival than maspin- tumors (Oncogene 2000;19:2398)

Positive staining (normal): breast, prostate epithelium

Positive staining (disease): ovarian, pancreatic and gastric carcinomas

Negative staining: breast carcinomas, prostate carcinomas; normal pancreas

Micro images: cervical CIN 3 (HGSIL) and squamous cell carcinoma


May-Grünwald-Giemsa

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Used for H. pylori; also blood and bone marrow staining

Micro images: IgA myeloma with Auer-rod like inclusions; fig 1: May-Grunwald-Giemsa; 2: α-naphthyl acetate esterase; 3: EM shows Auer-rod like inclusions and rough ER


Melanin

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Pigment normally found in skin, eye, substantia nigra, melanomas

Melanin stains are Fontana-Masson (stains melanin black) and Schmorl’s method (stains melanin blue-green)

Bleaching with potassium permanganate or hydrogen peroxide is used to remove melanin to examine cellular morphology

Note: pseudomelanin of melanosis coli, usually found in macrophages, is PAS positive; true melanin is not

Micro images: Melanin pigment in cells of malignant melanoma, Fontana-Masson stain


menin

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Gene at 11q13; mutations cause MEN1 syndrome

May regulate transcription of multiple differentiation regulating genes

Menin mutations and allelic loss of 11q13 are also reported in sporadic carcinoid tumors and sporadic pancreatic endocrine tumors


Mesothelin

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40 kDa differentiation antigen; precursor protein’s amino portion is megakaryocytic potentiating factor

Cytoplasmic membrane glycoprotein found on surface of mesothelial cells, mesotheliomas, ovarian carcinomas, pancreatic adenocarcinoma

May place a role in cellular adhesion

Positive staining (normal): mesothelial cells

Positive staining (disease): mesotheliomas, ovarian surface carcinomas

Negative staining: benign bile duct lesions


Microsatellite instability

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Changes at (CA)n and (GT)n repeats, associated with dysfunction of DNA repair mechanisms

Involve MLH1, MSH2 proteins

Associated with all cases of hereditary nonpolyposis colorectal cancer and 15% of sporadic colorectal cancers

Hallmark of hereditary nonpolyposis colon cancer (HNPCC) associated tumors is defective mismatch repair, reflect in tumor tissue as microsatellite instability and loss of mismatch repair proteins MLH1, MSH2, MSH6, PMS2

Mismatch repair defects found in 15% of sporadic colorectal cancer in >90% of HNPCC associated cancers

Defects present in 65% of adenomas from HNPCC patients - loss of staining in patient suspected of having HNPCC may be used to direct mutation analysis (Mod Path 2005;18:1095)

Micro images: loss of mismatch repair proteins in adenomas from HNPCC patients with disease causing mutations


MSH1 and MSH2

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Genes mutated in hereditary nonpolyposis colorectal carcinoma and sporadic colorectal carcinoma with microsatellite instability


Mucins

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Also called mucopolysaccharides; major glycoprotein components of mucus under normal circumstances

Large, highly glycosylated proteins with repeat tandem domains rich in serine and threonine sites for O-glycosylation; also contain glyco-conjugates [mucoproteins, glycoproteins, glycosaminoglycans, glycolipids] with high content of sialic acid [N-acyl derivative of neuraminic acid] or sulfated polysaccharide

Neuraminic acid is a 9 carbon amino sugar derived from mannosamine and pyruvate

Mucin stains highlight carbohydrate portion of glycoproteins, not the protein component

Best pan mucin combination may be PAS and Alcian blue

MUC - epithelial mucins, share a common characteristic of an elevated number of sequences repeated in tandem, that are different for each MUC

Two main families of MUC genes – gel forming / secreted mucins at locus 11p15 (MUC2, MUC5AC, MUC5B, MUC6) and membrane-bound mucins at locus 7q22, 3q and 1q21 (MUC1, MUC3A, MUC3B, MUC4, MUC12, MUC13, MUC17)

 

Mucin types include acid mucins and neutral mucins

Acid mucins: simple non-sulfated, simple mesenchymal, complex sulfated and complex connective tissue types

Acid-simple non-sulfated: contain sialic acid, found in epithelium (gallbladder [benign, adenocarcinoma], intestinal metaplasia in stomach); positive for PAS, Alcian blue at pH 2.5, colloidal iron, and metachromatic dyes. They resist hyaluronidase digestion.

Acid-simple mesenchymal: contain hyaluronic acid and digest with hyaluronic acid, found in tissue stroma and sarcomas.  Positive for Alcian blue at pH 2.5, colloidal iron, and metachromatic dyes; negative for PAS.

Acid-complex sulfated: found in adenocarcinomas; usually positive for PAS, Alcian blue at pH 1, colloidal iron, mucicarmine, and metachromatic stains. They resist hyaluronidase digestion

Acid-complex connective tissue: found in tissue stroma, cartilage, and bone; includes chondroitin sulfate, keratan sulfate; Positive for Alcian blue at pH 0.5; negative for PAS

Neutral mucins: GI tract, prostate; stain with PAS only (negative for Alcian blue, colloidal iron, mucicarmine, or metachromatic dyes); note that thyroglobulin and other neutral glycoproteins are also PAS positive

Mucin stains

Alcian blue: stains acid-simple non-sulfated and acid-simple mesenchymal mucins at pH 2.5, acid-complex sulfated mucins at pH 1.0 and acid-complex connective tissue mucins at pH 0.5; does NOT stain neutral mucins

Colloidal iron: acid mucopolysaccharides attract iron particles stabilized in ammonia and glycerin; requires formalin fixation; false positives include phospholipids and free nucleic acids; more specific if hyaluronidase pre-digestion;

stains acid-simple non-sulfated, acid-simple mesenchymal, acid-complex sulfated mucins. Does NOT stain neutral mucins or acid-complex connective tissue mucins

For chromophobe carcinomas, have diffuse strong staining with reticular pattern

Mucicarmine: Very specific for epithelial mucins, including adenocarcinomas; although insensitive; stain contains carmine (red coloring material) and aluminum chloride

PAS (periodic acid-Schiff): stains glycogen as well as mucins, but tissue can be pre-digested with diastase to remove glycogen; stains neutral and acid-simple non-sulfated and acid-complex sulfated mucins; does NOT stain acid-simple mesenchymal mucins and acid-complex connective tissue mucins

References: AJSP 2005;29:881 (MUC expression in salivary gland mucoepidermoid carcinoma)


MUC2

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Epithelial mucin expressed in intestinal goblet cells and airway epithelium; gene is at 11p15.5

Relatively specific for predicting colorectal origin for Paget’s disease (AJSP 2001;25:1469)

Gel-forming MUC2 mucin may act as barrier to prevent infiltration of malignant cells in breast mucinous/colloid carcinoma

Positive staining (normal): intestinal and airway epithelium

Positive staining (disease): mucinous carcinomas of colon, breast, pancreas, ovary and stomach

Negative staining: stomach, breast ductal and lobular carcinomas

Micro images: pregnancy related carcinoma


MUC3 (MUC3A and MUC3B)

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Upregulated by steroid hormones in vitro

Positive staining (disease): invasive breast carcinoma, gastric carcinoma (associated with poor prognosis)


MUC4

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Transmembrane or membrane bound mucin that provides a protective layer of mucus

Normally acts as barrier to apical surface of epithelial cells, playing a protective and regulatory role

Positive staining (normal): tracheobronchial mucosa, colon, stomach, cervix and lung; normal salivary glands

Positive staining (disease): pancreatic, colonic, pulmonary and gastric carcinoma


MUC5AC

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Protects epithelium

Positive staining (normal): stomach (foveolar epithelium of body and antrum), tracheobronchial mucosa, endometrium (mucinous metaplasia, eosinophilic change/metaplasia (Mod Path 2005;18:1243), surface syncytial change, ciliated change in 52%)

Positive staining (disease): extramammary Paget disease, but not mammary Paget disease or normal breast tissue (AJSP 2001;25:1469); mucinous carcinoma of ovary, diffuse-type gastric carcinoma (83%)

Negative staining: normal breast tissue

Micro images: poorly differentiated gastric carcinoma - fig 4a: CK20; 4b: MUC5AC; 4c: MUC6; 4d: DAS-1; 4e: CDX2;  MUC5AC+ endometrioid endometrial adenocarcinoma (fig 1d); MUC5AC staining in proliferative endometrium with eosinophilic change


MUC6

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Produces protective glycoprotein coat for gut epithelia

Positive staining (normal): stomach (pyloric glands), gallbladder, colon and endocervix

Positive staining (disease): invasive ductal carcinoma of breast, gastric carcinomas

Negative staining: normal breast tissue

Micro images: poorly differentiated gastric carcinoma - fig 4a: CK20; 4b: MUC5AC; 4c: MUC6; 4d: DAS-1; 4e: CDX2


Myeloperoxidase

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Enzyme cytochemistry for myeloperoxidase (not immunohistochemistry) is the most sensitive and specific stain for myeloid leukemias and granulocytic sarcoma

Stains neutrophils strongly (diffuse granular pattern), other granulocytes variably

Positive staining (enzyme cytochemistry): neutrophils, eosinophils, monocytes (variable), AML-M1, M2, microgranular M3

Positive staining (immunohistochemistry): granulocytic sarcoma

Negative staining (enzyme cytochemistry): lymphocytes, ALL

Micro images: granulocytic sarcoma (immunohistochemistry); myeloid sarcoma of breast (fig 5)


MyoD1

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Myogenic transcriptional regulatory protein expressed early in skeletal muscle differentiation

Sensitive but not specific for rhabdomyosarcoma due to cytoplasmic and non-specific background staining, AJSP 2001;25:1150

Stronger staining in alveolar vs. embryonal rhabdomyosarcomas

Interpretation: nuclear immunostaining

Positive immunostaining (normal): normal fetal muscle

Negative immunostaining: normal adult muscle


Myogenin

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Myogenic transcriptional regulatory protein expressed early in skeletal muscle differentiation

Sensitive and specific for rhabdomyosarcoma

Focal nuclear staining in desmoid tumors, infantile myofibromatosis, synovial sarcoma, infantile fibrosarcoma, entrapped atrophic or regenerative skeletal muscle, AJSP 2001;25:1150

Interpretation: nuclear immunostaining

Positive immunostaining (normal): normal fetal muscle

Negative immunostaining: normal adult muscle

Micro images: hepatorenal embryonal rhabdomyosarcoma; desmin (fig4a), myogenin (4b)


Myoglobin

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Oxygen binding protein

Positive staining (normal): striated muscle (cardiac, skeletal)

Positive staining (disease): rhabdomyosarcoma, other tumors with skeletal muscle differentiation


Myosin

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Contractile protein exists in smooth muscle form (non-sarcomeric) and skeletal muscle form (sarcomeric)


Neurofilament

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Major cytoskeletal element in nerve axons and dendrites

Consist of three distinct polypeptides, the neurofilament triplet

Metabolism appears to be disturbed in Alzheimer's disease, as indicated by the presence of neurofilament epitopes in the neurofibrillary tangles, and by severe reduction of gene expression for the light neurofilament subunit of the neurofilament triplet in brains of Alzheimer's patients

Positive staining (normal): neuronal cells

Positive staining (disease): central neurocytoma, neuroblastoma, medulloblastoma, retinoblastoma, Merkel’s cell tumor of skin, pancreatic endocrine neoplasms, carcinoid tumors, parathyroid tumors


Neurofibromin

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Produces by NF1 gene at 17q11.2

Tumor suppressor gene; member of GTPase activating protein (GAP) family of RAS regulatory proteins

Heterogeneous mutations in neurofibromatosis type 1 (NF1), the most common autosomal dominant inherited disorder in humans (1 per 3000); characterized by benign tumors of peripheral nerves, cafe au lait spots, retinal hamartomas; also increased risk of malignancy, gastrointestinal stromal tumors (AJSP 2005;29:1170)

Downregulates p21 and Ras, and also links integral membrane protein with cytoskeleton; mutations cause constitutive RAS activation


NF 2

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At 22q11-13.1; tumor suppressor protein

Produces protein called merlin or schannomin

Deleted in soft tissue perineurioma

Both copies inactivated in up to 60% of sporadic meningiomas

Often no protein expression in schwannoma

May be involved in tumorigenesis of schwannomas and some meningiomas


NFKB

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Nuclear Factor Kappa B

Transcription factor that is a heterodimer of p50 and p65/RelA

RelA contains TNF-alpha binding sites

Activated by TNF, radiation, daunorubicin

TNF alpha and IL-1 degrade IKB inhibitory cytoplasmic retention proteins, leading to rapid nuclear translocation of NKFB

Regulates cytokine inducible gene expression, including hemopoietic growth factors, chemokines and leukocyte adhesion molecules


N-myc

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Also called MYCN, gene at 2p24

Amplified gene forms double minutes and homogenously staining regions, and produces excessive N-myc protein

Neuroblastoma: amplification (>10 copies by Southern blot or FISH) associated with poor prognosis and 1p36.3 deletions


Nonspecific esterase

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Also called alpha-naphthyl acetate, alpha-naphthyl butyrate

Note: although abbreviation is NSE, is DIFFERENT from neuron specific esterase

Note: opposite staining for alpha-naphthyl chloroacetate esterase

Positive enzyme cytochemistry: monocytes (inhibited by sodium fluoride), AML-M4, M5, mature T cells and T-all (cytoplasmic dot), carcinomas, megaloblastic erythrocytes, cytoplasm focally in AML-M7

Negative enzyme cytochemistry: AML-M0, M1, M2, M3, ALL (usually)

Micro images: IgA myeloma with Auer-rod like inclusions; fig 1: May-Grunwald-Giemsa; 2: α-naphthyl acetate esterase; 3: EM shows Auer-rod like inclusions and rough ER; AML M5b (fig 2)


NPM-ALK fusion protein

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Formed by consistent breakpoints in t(2;5)(p23;q35); has truncated NPM and ALK proteins

Contains only constitutively active catalytic domain of ALK

Fusion protein found in anaplastic large cell lymphoma (13-50%); when present, can be used to differentiate from Hodgkin’s lymphoma

Patients with fusion protein appear to have better prognosis

Appears to phosphorylate/activate members of multiple signaling pathways influencing cell proliferation and apoptosis, including ras, Grb2, Shc, IRS-1, JAK/STAT, PI3-kinase/AKT and FOX03a


Nucleophosmin (NPM)

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Also called B23, numatrin; gene at 5q35

Highly conserved non-ribosomal nucleolar phosphoprotein involved in assembling preribosomal particles into small and large ribosomal subunits; binds with high affinity to ss nucleic acids, exhibits activity that destabilizes the RNA helix and is associated with the most mature nucleolar preribosomal ribonucleoproteins.

May contribute active promoter to NPM-ALK; ALK promoter is normally silent in lymphoid cells

Hypothesis: IL-2 or T-cell mediated signals activate substrates; with NPM-ALK, get constitutive activation (note ALCL arises from activated T lymphocytes, which depend on IL-2 for growth and viability)

Fusion protein found in anaplastic large cell lymphoma (13-50%); when present, can be used to differentiate from

Hodgkin’s lymphoma


Oil Red O

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Stain identifies neutral lipids and fatty acids

Fresh smears / cryostat sections of tissue are necessary because alcohols used in tissue processing remove lipids

Rapid and simple routine stain

Uses:

(1) differentiate fibroma from thecoma (not that important a distinction)

(2) diagnose renal cell carcinoma, sebaceous gland tumors of skin, lipid-rich carcinomas

(3) identify fat emboli in lung tissue or clot sections of peripheral blood

Micro images: fat emboli in lung


p16 INK4a

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Also called MTS1, CDKN2A; at 9p21 near p15INK4b

Plays crucial role in regulation of G1-S transition

Tumor suppressor gene that inhibits cyclin D dependent protein kinases CDK4 and CDK6, which prevents phosphorylation of Rb, which prevents its dissociation from E2F transcription factor; which prevents cell progression into S phase of cell cycle

Frequently silenced in tumors by epigenetic or genetic abnormalities, including promoter CpG methylation or less often mutations

Cervix: overexpressed in squamous intraepithelial lesions, particularly HG SIL (97% of biopsies, Mod Path 2005;18:267)

ALL (pediatric): homozygous deletions noted in 80% of cases with 9p21 abnormalities

T-ALL: deleted in 80% of all cases (even with normal #9)

Esophageal carcinoma: high frequency of abnormalities

Lymphoma: p16 gene methylation present in 60% of pulmonary MALT lymphomas; may be early event (Mod Path 2005;18:1187); methylation also associated with Hodgkin’s lymphoma, plaque phase of mycosis fungoides, monoclonal gammopathy of unknown significance

Melanoma: abnormalities in 50% of sporadic cases

Pancreatic carcinoma: high frequency of abnormalities

Squamous cell carcinoma, cutaneous: mutations present

Micro images: strong full thickness expression

Molecular images: p16 gene methylation in pulmonary MALT lymphomas


p21 WAF1/CIP1

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Gene at 6p21.2

Negative cell cycle regulator in G2-M phase and G1-S phase

Regulated transcriptionally by p53


p27 kip1

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Cyclin dependent kinase inhibitor leading to cell cycle arrest in G1 phase

Member of Cip/Kip family of proteins

Loss or reduced expression is associated with poor outcome in carcinoma of breast, prostate, GI tract and lung

Interpretation: nuclear stain


PARP

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Poly (Adenoside diphosphate Ribose) Polymerase, a nuclear enzyme

Involved in DNA repair, genome surveillance and integrity, predominantly in response to environmental stress

Inhibits the Ca/Mg dependent endonuclease

An immediate cellular reaction to DNA strand breakage induced by alkylating agents, ionizing radiation or oxidants; may then mediate DNA base-excision repair; also is an early step in apoptosis due to cleavage by CPP32 (caspase 3), which may lead to loss of its inhibitory effect, promoting apoptosis

Positive staining (disease): melanoma (37%)

Negative staining: normal melanocytes (only scattered, focal staining)

References: Hum Path 2005;36:724 (melanoma)


PAS (Periodic Acid-Schiff) 

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A special stain, not an immunostain

Theory: substances with nearby glycol groups or their amino or alkylamino derivatives are oxidized by periodic acid to form dialdehydes, which combine with Schiff's reagent to form an insoluble magenta compound 

Used for formalin fixed tissue and enzyme cytochemistry; can be used for frozen sections with modifications (Eur J Gynaecol Oncol 1998;19:482. AJSP 1992;16:87)

Stains basement membrane (normal and in tumors), glycogen, some mucins (see below) and mucopolysaccharides

A routine stain in brain (with Luxol fast blue), cornea, kidney, liver and skeletal muscle specimens for nontumor pathology

Some mucins (see below) are PASD (PAS with predigestion with diastase) positive (i.e. stain is present after diastase predigestion; also called diastase resistant); glycogen is PASD negative (also called diastase sensitive because diastase removes PAS staining)

PAS stains neutral and acid-simple non-sulfated and acid-complex sulfated mucins

PAS does NOT stain acid-simple mesenchymal mucins and acid-complex connective tissue mucins

Also stains various inclusions, bodies, granules and secretions composed of mucopolysaccharides or mucins

Uses:

Breast cytology: PASD positive cells with internal structure and producing nuclear indentation, particularly in dissociated or atypical cells, correlate with malignant histology (J Clin Pathol 2001;54:146)

Fungi: stains fungal cell walls; PAS+ granule at anterior end of mature spores is diagnostic of microsporidia (BMC Clin Pathol 2006;6:6)

Hematopathology: ALL, AML M5-M7 are PAS+

Kidney: recommended for routine evaluation of renal biopsies due to basement membrane staining; also useful to diagnose renal cell carcinoma (stains glycogen, removed by diastase)

Liver: routine stain; also stains inclusions of alpha-1-antitrypsin disease

Lung: stains amorphous or granular globules in BAL fluid in pulmonary alveolar proteinosis (J Clin Pathol 1997;50:981)

Muscle biopsies: routine stain to demonstrate glycogen

Pancreas: acinar cell carcinoma (PASD+)

Parotid glands: zymogen granules are PAS+

Prostate: Cowper’s glands are PASD+ (AJSP 1997;21:550)

Skin: eosinophilic globoid bodies (Kamino bodies) in Spitz nevus are PASD+

 

PAS (continued)

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Small intestine: stains Whipple’s disease bacteria (Am J Clin Pathol 2002;118:742, Hum Path 2003;34:589); strong cytoplasmic staining present in microvillous inclusion disease versus linear brush border staining in normals (AJSP 2002;26:902)

Testis: stains intratubular germ cell neoplasia (AJSP 1994;18:947) and seminoma (PAS+, PASD negative), but not normal seminiferous tubules

Tumors: adenocarcinoma of various sites (mucin is PASD+), alveolar soft parts sarcoma (PASD+ crystalline structures), apocrine carcinomas, basement membrane containing tumors (cylindroma [AJSP 2001;25:823], eccrine spiradenoma), clear cell tumors (stains glycogen), glycogen rich carcinomas, glycogen rich/balloon cell melanoma (Archives 1998;122:353), granular cell tumor (cytoplasmic granules), hyaline globules in renal tumors (Hum Path 1997;28:400), mucinous tumors, Paget’s disease of breast

Other: stains malakoplakia

Enzyme cytochemistry: coarse granular staining

Positive staining (normal): basement membrane, fungi, glycogen (removed after diastase or amylase predigestion), mucins (neutral and acid-simple non-sulfated and acid-complex sulfated types), surfactant

Positive staining (disease): ALL (75%, block staining), alpha-1-antitrypsin inclusions, alveolar soft part sarcoma (intracytoplasmic crystals), AML-M5a, M6 (60%), M7, basement membrane containing tumors (cylindroma), clear cell tumors, malakoplakia, renal cell carcinoma (PAS+ glycogen removed with diastase), parasites

Negative staining: mucins (acid-simple mesenchymal and acid-complex connective tissue types)

Micro images:

bacteria - atypical mycobacteriarhodococcus #1 is PAS+ in colonic histiocytes (far right)#2 in pulmonary histiocytes (PASD+)Tropheryma whipplei in histiocytes in hippocampus (fig 3)

blood and marrow elements - various images

brain - acquired hepatocellular degeneration (with Luxol fast blue)

breast cytology - PASD+ malignant tumorsPASD “not actually positive” benign tumors

CNS - secretory meningioma PAS+ inclusions #1#2

colon - malakoplakia (fig 3: PAS, 4: calcium stain)

cornea - Fuch’s dystrophy

 

PAS (continued)

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fungiblastomycescandida of esophagus #1#2lungtongueCoccidioidis immitis of tongue (fig 4);  cryptococcal meningitis;  histoplasmosis of colon in HIV+ woman (fig 3);  microsporidiamucor #1 of stomach#2 of skin; ringworm (skin)

heart - glycogen storage disease #1#2 (removed by diastase)

kidney - normalAlport’s syndrome #1#2 (fetal glomerulus)amyloidosis #1#2chronic pyelonephritisdense deposit disease #1#2Fabry’s disease #1#2focal segmental glomerulosclerosisHenoch Schoenlein purpura;  IgA nephropathy #1#2immunotactoid glomerulonephritismembranoproliferative glomerulonephritis type I #1#2with crescentwith doubling of capillary wallnephronophthisisnodular glomerulosclerosis #1#2#3SLE #1#2#3#4thrombotic microangiopathy

liver - alpha-1-antitrypsin deficiency #1#2hepatitis A with confluent necrosis

lung - pneumocystis pneumoniapulmonary alveolar proteinosis: globules (B/D) are PAS+; A/C are H&E;  surfactant in hyaline membrane disease

parasites - Acanthamoeba histolytica #1 (colon)#2 (cornea)#3 (brain)Echinococcus (fig 2/3) in bone

parotid gland - normal

skeletal muscle - increased glycogen (PAS+, PASD-) in desmin related myopathyPAS+ diastase sensitive material in McArdle’s disease #1#2

skin - Fabry’s disease

small intestine - normal (fig 2), microvillous inclusion disease (fig 3/4)

tumors - acinar cell carcinoma of pancreasadenocarcinoma of colonalveolar soft parts sarcoma #1, in cervix#2clear cell acanthomaclear cell carcinoma of ovarycylindroma #1#2eccrine spiradenomaendolymphatic sac papillary tumor of earEwing’s sarcoma;  glycogen rich carcinoma of breast - fig 1/2: infiltrating nests of atypical cells with abundant clear cytoplasm; 3: PAS+ granules; 4: PAS staining is removed by diastaseglycogen rich urothelial carcinomagranular cell tumorjuxtaglomerular cell tumor of kidneyKaposi’s sarcomalymphoplasmacytic lymphomamucinous cystadenoma of ovaryPaget’s disease-penissecretory carcinoma of breastsecretory meningiomatubulocystic carcinoma of kidney

Virtual slides: cryptococcus of brain

References: Wikipedia, MacManus (Hoslink), Stainsfile


PAX-7

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1p36

Transcription factor and member of the PAX family of developmental control genes

Fused with FKHR gene via t(1;13)(p36;q14) in alveolar rhabdomyosarcoma.


PCNA

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Proliferating Cell Nuclear Antigen; also called cyclin

Nonhistone 36 kDa nuclear protein with a role in DNA synthesis, DNA repair, and cell cycle progression

Coordinates synthesis of both leading and lagging strands at the replication fork during DNA replication

Expression correlates with proliferation activity


PDGF

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Platelet Derived Growth Factor, also called c-sis

Produced and secreted by megakaryocytes, activated vascular endothelial cells, macrophages, fibroblasts, smooth muscle cells

Composed of combinations of A and B isoforms (AA, AB, BB)

PDGF alpha receptor binds to all 3 isoforms; PDGF beta receptor binds only to BB with high affinity

Chondrosarcoma: high expression of PDGF alpha receptor associated with poorer overall survival, AJSP 2001;25:1520

Ovarian cancer: PDGF alpha receptor expression associated with shorter overall survival


Pentachrome stain

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Stains collagen and mucin in thrombi, plaques


Phosphotungstic acid-hematoxylin (PTAH)

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Variant of trichrome stain; demonstrates intracytoplasmic filaments in muscle and glial cells

Micro images: myxopapillary ependymoma of broad ligament (fig 7)


PKD1

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Gene at 16p13.3 produces polycystin1; gene is adjacent to TSC2 gene for tuberous sclerosis

Mutations can cause autosomal dominant polycystic kidney disease


PKD2

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Gene at 4q22 produces polycystin2

Mutations can cause autosomal dominant polycystic kidney disease


PKD3

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Mutations can cause autosomal dominant polycystic kidney disease


PLAG1

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PLeomorphic Adenoma Gene 1, at 8q12, often due to t(3;8)(p21;q12) involving CTNNB1 and PLAG1 genes

Proto-oncogene consistently rearranged in pleomorphic adenomas of salivary glands in both epithelial and myoepithelial cells (Mod Path 2005;18:1048)

Micro images: karyotype, FISH and CISH


PLAP

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Placental Alkaline Phosphatase

Positive staining (normal): some infantile germ cells until age 1

Positive staining (disease): most germ cell tumors, particularly seminomas; also breast, lung, ovarian carcinomas (some)


PML-RAR alpha

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Fusion protein present in most cases of AML-M3 due to t(15;17)(q22;q11-12)


Rb

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Retinoblastoma gene / protein

Tumor suppressor gene at 13q14

Encodes a 110-114 kDa nuclear protein that plays a crucial role is cell cycle progression by regulating cell cycle arrest at G1-S

Active form is hypophosphorylated and binds to E2F family of transcription factors, which bind to DNA to inhibit transcription

Inactive form is phosphorylated via cyclin D-CDK4/CDK6 complexes, which are inhibited by p16INK4a

Rb inactivity [leading to transcription] caused by (a) loss of p16INK4a causing phosphorylation of Rb, making it inactive; (b) Rb mutations; (c) Rb hyperphosphorylation; (d) overexpression of cyclin D; (e) DNA tumor virus SV40 T antigen, adenovirus E1A and HPV-E7 protein

Inactive Rb is reactivated by cell cycle specific phosphatase in M phase

Germline mutations or loss predispose to retinoblastoma and osteosarcoma

Somatic mutations cause various tumors

Point mutations inhibits Rb-1 and c-myc binding

For thyroid neoplasms, follicular adenomas were usually positive, follicular and papillary carcinomas were usually negative (Mod Path 2000;13:562)

Positive staining (normal): fibroblasts, endothelial cells, lymphoid cells within thyroid neoplasms


RCC

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Also called RCC Ma (Renal Cell Carcinoma Marker)

Mouse monoclonal antibody generated against crude microsomal fraction of proximal tubules from normal human kidney

Specific for glycoprotein in renal proximal tubular brush border

Sensitive and specific for primary renal cell carcinoma (AJSP 2001;25:1485);

Positive in 93% of primary and 67%-84% of metastatic renal cell carcinomas

Most clear cell (84%) or papillary RCCs were positive, compared to 0% to 56% of chromophobe carcinomas, 0% sarcomatoid carcinomas, 0% collecting duct carcinomas, 0% oncocytomas

Micro images: pulmonary adenocarcinoma metastasis (left) to renal cell carcinoma (right) - CK7 (2A); TTF1 (2B); RCC (2C)


RET

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Gene at 10q11.2

Receptor tyrosine kinase expressed in neural crest cells

RET ligand is glial-derived neurotrophic factor

Activating mutations in 90% of patients with MEN 2A and 2B and FMTC (familial medullary thyroid carcinoma)

Inactivating mutations in Hirschsprung's disease

RET/PTC gene arrangement is common in papillary thyroid carcinoma; also seen in Hashimoto’s thyroiditis

Includes RET/PTC1 (60-70%), RET/PTC3 (20-30%)

Rare families have FMTC & Hirschsprung's, perhaps due to tissue-specific modifiers

References: Mod Path 2001;14:246


Reticulin

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Demonstrates reticular fibers and basement membrane material

Not related to reticulum cells

Reticular fibers: thin, usually type III collagen, widespread in connective tissue throughout the body

Basement membrane is composed of type IV collagen and laminin

Both have bound proteoglycans highlighted by silver stains and PAS

Uses:

Often not helpful in nonclassic cases

Outlines architecture of liver and spleen

To diagnose hemangiopericytoma, vascular smooth muscle, fibrosarcoma or fibrothecoma (stains each cell) vs. endothelial cell tumors (stains outside of all cells), MPNST (runs parallel to spindle tumor cells without surrounding them at the poles)

Micro images: normal liver; normal spleen; leiomyosarcoma; glomus tumor (fig 2D); gallbladder paraganglioma (fig 1b); alveolar soft parts sarcoma (fig 2a); reticulin stain outlines each cell in hemangiopericytoma of breast; reticulin stain demonstrates stroma fibers, but fibers do not completely surround neoplastic glands in tubular carcinoma of breast


Retinoic acid, all-trans

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Inhibits in vitro transformation of monoctyes to collagen-producing spindle shaped macrophages, and suppresses type 1 collagen gene expression in lung fibroblasts


SHP-1

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Also called Srk Homology domain 2 containing Protein phosphatase 1

Non-transmembrane protein phosphotyrosine phosphatase

Modulates intracellular signaling for various molecules

Preliminary study suggests helpful in differentiating mantle/marginal zone lymphomas (SHP-1+) from follicular lymphomas (SHP-1 negative), AJSP 2001;25:949

Positive staining (normal): mantle zone, marginal zone, interfollicular zone of lymph node

Positive staining (disease): mantle cell lymphoma, marginal zone lymphoma, SLL/CLL

Negative staining: germinal centers (or weak), follicular lymphomas

 

Sialyl-Tn antigen

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Also called CD 175s

Carbohydrate associated with apomucins MUC1, MUC2; produced in the initial steps of mucin biosynthetic pathway

Presence associated with aggressive tumors

High pre-operative serum levels predict liver metastasis and poor prognosis after resection for gastric cancer

Definitive Phase III trial of STN vaccine in metastatic breast cancer patients began 2001

Positive staining (disease): carcinomas

 

Silica

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Present in minerals and building materials

Most forms are inert, cannot be stained in tissue, can be demonstrated by white birefringence on polarization

Most often present in lung, occasionally in lymph nodes

Street drugs for injection are often diluted with silica or talc

Micro images: silica crystals in silicosis of lung, polarizedpolarizable crystals in lung with intravenous drug use

 

Sirius red

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Amyloid stain similar to Congo red

Micro images: primary cutaneous localized amyloidosis - fig 2: Sirius red; 3: cytokeratin MNF

References: stainsfile.info


Sudan Black B

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Stains lipids in granulocytes; useful if fresh specimens not available or in patients with myeloperoxidase deficiency

Positive enzyme cytochemistry: neutrophils, monocytes (variable), AML-M1, M2, microgranular M3, negative in ALL

 

Survivin

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Inhibitor of apoptosis protein; may also enhance proliferative activity of tumor cells

Overexpression enhances cell survival

Interpretation: cytoplasmic staining

Positive staining (normal): fetal tissues

Positive staining (disease): hepatocellular carcinoma, endometrial carcinoma

Negative staining: most normal, terminally differentiated tissue


TRAP (Tartrate resistant acid phosphatase)

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One of seven isoenzymes with different tissue distribution

TRAP is found in hairy cell leukemia; other acid phosphatases are found in red blood cells, prostate, white blood cell lysosomes

Sensitive and relatively specific for hairy cell carcinoma when combined with DBA.44 positivity (AJSP 2005;29:474)

Positive staining (normal): B lymphocytes of marginal zone, osteoclasts

Positive staining (disease): hairy cell leukemia, mantle cell lymphoma (57%), splenic marginal zone lymphoma (some), primary mediastinal B cell lymphoma (54%), CLL/SLL (41%), giant cells in giant cell tumor of bone and soft tissue (Hum Path 2005;36:945)

Micro images: giant cell tumor of bone - mononuclear and giant cells are positive (fig 1D); giant cell tumor of tendon sheath - mononuclear and giant cells are positive (fig 2C)


Tattoo pigment

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Usually black, non-polarizable

Red tattoo pigment often contains cinnabar (which has mercury in it)

Micro images: Tattoo pigment in dermis of skin, H and E stain


tau

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Abnormal accumulation of tau protein is seen in progressive supranuclear palsy, usually in neurons, less often in astrocytes

Images: Progressive supranuclear palsy


Telomerase

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A ribonucleoprotein multisubunit enzyme complex that functions as a specialized reverse transcriptase, to synthesize telomeric repeats (TTAGGG) to the 3’ ends of human chromosomes

Components of telomerase: RNA template, telomerase associated protein, human telomerase reverse transcriptase (hTERT)

RNA template and telomerase associated protein are expressed ubiquitously

hTERT protein expression is highly regulated, generally correlates with telomerase activity; reexpression correlates with laryngeal carcinogenesis (Mod Path 2005;18:406)

Interpretation: hTERT is a nuclear stain

Micro images: hTERT expression in larynyx - normal epithelium (in isolated basal cells); basal cell hyperplasia (in occasional basal cells); carcinoma in situ (full thickness staining); squamous cell carcinoma (present in most cells)


Tenascin

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Also called tenascin C

Large glycoprotein of extracellular matrix, synthesized by fibroblasts, composed of epidermal growth factor like repetitions

May function in epithelial-mesenchymal interactions

Expressed during embryogenesis, growth, wound healing, inflammation

Increased in carcinoma of Ampulla of Vater, breast, colon, lung, prostate

Pheochromocytoma: strong expression associated with malignancy, AJSP 2001;25:1419


Thrombomodulin

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Also called CD141

Marker of mesotheliomas, endothelial cells and coagulation factor

Cofactor for the thrombin-mediated activation of protein C

Important fibrinolytic inhibitor, as it decreases activation of plasminogen to plasmin

Critical for activation of protein C and initiation of the protein C anticoagulant pathway

Plasma CD141 levels are associated with endothelial damage

Interpretation: predominantly membranous staining

Uses:

Mesothelioma vs. lung adenocarcinoma: 64% sensitive, 95% specific for mesotheliomas, but must exclude vasculature; see membranous staining of periphery with isolated papilla

Urothelial carcinoma (positive) vs. renal cell, prostate, endometrial or colonic carcinoma, AJSP 2001;25:1380

Squamous cell carcinoma (positive), Am J Clin Pathol 1998;110:385

Positive staining (normal): Endothelial cells, megakaryocytes, platelets, monocytes, neutrophils, smooth muscle cells, synovial lining cells, keratinocytes, mesothelial cells

Positive staining (disease): epithelial mesotheliomas, urothelial carcinomas, squamous cell carcinomas

Negative staining: adenocarcinoma of colon, endometrium, kidney, lung, kidney, prostate; sarcomatoid mesotheliomas


Thyroglobulin

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Large glycoprotein (MW 670K) produced by thyroid follicular cells; later iodinated to form T3 and T4

Specific marker of thyroid differentiation

Micro images: thyroglobulin+ (artifact) lobular breast carcinoma metastatic to thyroid


TIA1

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Associated with activated cytotoxic T cells


Trichrome

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Stains collagen blue

Phosphotungstic or phosphomolybdic acid is used with anionic dyes

Micro images: chronic active hepatitis with hepatocyte collapse; cerebral abscess; scleroderma with fibrosis of submucosa in stomach


Tryptase

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Dominant protein of human mast cells

Negative staining: eosinophils, basophils, neutrophils, lymphocytes, monocytes


Tuberin

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Encoded by TSC2 gene on 16p13.3; adjacent to PKD1 gene for autosomal dominant kidney disease

Causes tuberous sclerosis (see TSC1)

Homologous to GTPase activating protein

Broadly expressed in many organs and tissues, including myometrium and most smooth muscle

Negative regulator of cell cycle – inhibits cell proliferation

Inactivation causes benign neoplasms in patients with tuberous sclerosis complex

Reduced immunostaining is associated with uterine leiomyomas (Mod Path 2005;18:179)


Tubulin

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Structural protein involved in assembly of mitotic spindles

Increased expression is associated with increased mitotic activity

Interpretation: cytoplasmic staining in mantle cell lymphoma

Positive staining (normal): germinal centers (but not mantle zones) of benign lymph nodes

Micro images: staining in tonsil (fig 2a), mantle cell lymphoma (2d)


Tumor necrosis factor (TNF)

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Also called cachectin

Initiates similar responses as lymphotoxin alpha

Secreted by macrophages and lipopolysaccharides or macrophage activating agents

Binds to 55kDa receptor on many cells throughout body

Mediators:  TRADD, TRAP-1, 55.11

Has many biologic activities; initiate signals for cell proliferation and apoptosis; required for normal development and function of immune system; suppresses expression of lipoprotein lipase and anabolic enzymes in fat

In large boluses, modifies coagulation properties of endothelial cells, activates neutrophils, induces release of inflammatory cytokines (IL-1), causing cardiovascular collapse

In small amounts, causes symptoms of inflammatory response of bone resorption, fever, anemia, wasting

Both triggers apoptosis and activates NFKB which blocks apoptosis

TNF and IL-1 react with hypothalamic receptors, leading to stimulation of prostaglandin and leukotriene mediated pathways that reset brains thermoregulatory center


Tyrosinase

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Also called T311 (for immunohistochemistry)

Melanocyte specific antigen important in melanin synthesis and melanosome formation

Melanomas: diffuse reactivity compared to diminished expression towards base in nevi or melanomas with paradoxical maturation

Positive staining (disease): sinonasal melanomas, oral mucosal melanomas, desmoplastic melanomas, AJSP 2001;25:782


Ubiquitin

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Triggers pathway for protein degradation associated with turning on and off cell cycle regulators

Can turn on cyclin-CDK complexes by destroying its inhibitor

Micro images: neuronal inclusion staining in motor neuron disease


Unknown primary

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Breast: BCA225+, CEA-, and CA125-

Colon: CEA+, BCA225-, and CA125-

Lung: BCA225+, CEA+, and CA19-9-

Ovary: CA125+ and CEA-

Upper GI tract: CEA+, CA19-9+, and CA125+

Correctly predicts known primary site in 66% of cases, Am J Clin Pathol 1997;107:12


Urates / uric acid

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Uric acid crystals seen in acid urine

Urates present in tissue as sodium urate, but soluble in aqueous solutions and slightly soluble in weak alcoholic solutions, so tissue must be fixed in 95%/100% alcohol to prevent leaching of urates.

Urates are stained black by GMS

Sodium urate crystals are birefringent on polarization

Micro images: uric acid crystals, polarized, with red plate


VEGF

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Vascular Endothelial Growth Factor

Exists in 4 different homodimeric isoforms due to alternate splicing

Potent angiogenic growth factor that stimulates endothelial cell proliferation and induces microvessel permeability

Protein and mRNA are overexpressed in various tumors

May have prognostic significance in esophageal adenocarcinoma (Hum Path 2005;36:955)

 

VEGF-D

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Induces angiogenesis and lymphangiogenesis with VEFR receptor 2 (VEGFR2) and VEGFR3 (also called Flt4)

Associated with lymphangiogenesis and lymphatic metastasis in papillary thyroid carcinoma (Mod Path 2005;18:1127)

Positive staining (normal): thyroid follicular epithelium

Micro images: papillary thyroid carcinoma-diffuse and intense staining (fig 1f)

 

VEGFR3

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Vascular Endothelial Growth Factor Receptor 3

Also called Flt4

Specific marker for lymphatic endothelium

Also expressed in blood vascular endothelium of malignant tumor and granulation tissue

Micro images: papillary thyroid carcinoma (fig 1e)

 

Villin

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Actin binding protein present in cytoskeleton of intestinal microvilli; has critical role in maintaining brush border organization

Relatively specific for GI epithelium with brush border microvilli or adenocarcinomas derived from them

Uses: (1) primary bladder adenocarcinoma vs. colorectal carcinoma to bladder - negative CDX2 and negative villin suggests bladder primary (Mod Path 2005;18:1217), (2) colorectal adenocarcinoma (villin+) vs. ovarian adenocarcinoma (villin-)

Positive staining (normal): digestive tract epithelium, renal proximal tubules, hepatic bile ducts

Positive staining (disease): pulmonary adenocarcinomas, renal cell carcinoma, colonic adenocarcinoma (98%)

Negative staining: bronchiolar epithelium, pulmonary alveolar cells, bronchial gland cells, renal distal tubules

Micro images: bladder adenocarcinoma - (a) secondary colorectal  is villin+ as is (b) primary bladder tumor


Vitronectin

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Positive staining (disease): astrocytomas; giant cells in giant cell tumor of bone and soft tissue express vitronectin receptor (Hum Path 2005;36:945)

 

von Hippel Lindau (VHL)

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Tumor suppressor gene (autosomal dominant) at 3p25-26, with 3 regions (A, B, C)

Familial cases of von Hippel Lindau syndrome are associated with translocations of this gene

Gene is inactivated by hypermethylation of CpG island in 5' region causing lack of expression of VHL or by mutation in binding region

Wild type protein competes with A subunit for binding to B/C complex; active mutation occurs in homologous sequence region

Mutated protein does not bind to elongin B and C subunits, which allows subunit A to bind, and increases rate of elongation through suppression of RNA polymerase pausing

Abnormalities associated with renal cell carcinoma, clear cell type

 

von Willebrand factor (vWF)

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Large glycoprotein involved in platelet aggression and adhesion to subendothelial matrix

Somewhat sensitive (50-75%) for vascular tumors; CD31, CD34 or perhaps FLI-1 are more sensitive

Interpretation: cytoplasmic stain; endothelium should be a positive internal control

Positive staining (normal tissue): endothelial cells, megakaryocytes, subendothelial connective matrix; also areas of tumor necrosis and hemorrhage

Positive staining (disease): blood vessels in tumors, vascular tumors, metastatic osteosarcoma

Micro images: positive staining of endothelium (fig 2A)

References: Mod Path 2005;18:388 (expressed in metastatic osteosarcoma)

 

Warthin-Starry silver stain

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Stains Helicobacter pylori, spirochetes

Micro images: Spirochetes with Warthin-Starry silver stain


wnt

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Beta-catenin and T cell factor (Tcf) are distal components of the highly conserved Wnt pathway that govern cell fate and proliferation in lower organisms.


Wright-Giemsa stain

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Also called Wright’s stain

A "Romanowsky-type" stain, composed of mixtures of methylene blue, azure, and eosin compounds

Used to stain peripheral blood smears

Methylene blue is a metachromatic stain, meaning that some tissue components (mast cell granules, cartilage, mucin, amyloid) stain purple and not blue

Micro images: Peripheral blood smear, Wright's stain.


WT1

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Tumor suppressor gene at 11p13

Protein is transcriptional regulator that apparently inhibits transcription of growth promoting genes

Involved in development of tissues from inner layer of intermediate mesoderm

Interpretation: nuclear stain

Uses: (1) ovarian carcinoma (WT1+) vs. breast/pancreatic carcinoma (WT1 negative)

Positive staining (normal): fallopian tube, kidney, mesothelium, ovarian granulosa cells, Sertoli cells, spleen

Positive staining (disease): acute myeloid leukemia, cystic partially differentiated nephroblastoma, desmoplastic small round cell tumor, malignant mesothelioma, metanephric adenoma, nephrogenic rests, ovarian carcinomas (serous carcinoma [almost all], transitional, small cell, AJSP 2005;29:1034), peritoneal serous carcinoma involving an endometrial polyp-80% (AJSP 2005;29:1074), rhabdoid tumor, Wilm’s tumor

Negative staining: endometrial glands, ovarian mucinous and clear cell carcinomas (Archives 2005;129:85)

Micro images: metanephric adenoma (fig D), ovarian tumor subtypes #1; #2


Cell cycle

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In non-neoplastic cells, is controlled by proteins that intervene at checkpoints to prevent progression to next phase

Enzymatic activity of protein is activated by phosphorylation, which changes their conformation, and usually leads to more phosphorylation (or kinase) activity

Phosphorylation also creates docking sites on phosphorylated proteins, especially with tyrosine kinases, which recruits other target proteins

Cell cycle:  G1 to S (DNA synthesis) to G2 to M (mitosis)

Cells NOT in the cell cycle (in resting phase) are in G0

 

G1:

(1) pRb (retinoblastoma protein) binds to E2F (transcription factor), which blocks transcription of S phase genes; cells stimulated by extracellular signals cause accumulation of CDK 4-6/cyclin D1 complex, which phosphorylates Rb, reducing its affinity for E2F, causing pRb to dissociate, freeing E2F to activate S phase genes

(2) Ubiquitin, in response to unknown stimulus, binds to and destroys CDK inhibitors, making CDK active

(3) p16 gene (CDKN2) inhibits CDK4-6/cyclin D1 complex, which prevents phosphorylation of Rb, which prevents progression of cell cycle into S phase

 

S:

Growth factor binds to receptor on outer membrane

Receptor on inner membrane dimerizes, which activates tyrosine or serine/threonine kinases

Dimerized receptor subunits phosphorylate each other on tyrosine residues, creating docking sites for other proteins

Grb2, an adaptor molecule which transfers the activation state, docks to phosphotyrosine and attracts the Sos protein

Sos, a nucleotide exchange factor, attracts Ras

Ras binds to inner membrane by linking to an isoprenyl group (farnesyl): process is called prenylation

Ras binds GTP and becomes activated

Activated Ras is a kinase, which activates Raf-1 via GTP

Somehow Raf-1 is translocated from cytosol to plasma membrane

Ras is inactivated by GAP (GTPase activating protein), which increases Ras's intrinsic GTPase activity

Activated Raf-1 is a kinase, which activates MEK

MEK activates MAPK/ERK (mitogen activated protein kinase / extracellular signal regulated kinase) using ATP

Activated MAPK/ERK directly activates:

(a)ERK1/2 (extracellular signal regulated protein kinases 1 and 2)

(b) BAD (bcl2 family) by phosphorylation

(c) Ribosomal S6 protein kinase (RSK = pp90rsk), which translocates to nucleus and phosphorylates several transcription factors, including jun

(d) Transcription factors (fos)

(e) (alternate pathway) CREB kinase, which phosphorylates and activates CREB at serine 133, which activates intermediate early growth and some delayed response genes with CREB binding sites

Activated MAPK also translocates to nucleus, where it phosphorylates and activates transcription factor ELK-1 at Ser 383

ELK1, with serum response factor, binds to serum response element within IEG promoter to activate IEG genes

Activated fos and jun bind near myc gene, which initiates gene transcription

Activated myc activates other genes, including cyclin D1

Cyclin D1 may initiate progression of cells from S

 

G2:

M phase promoting factor (MPF) is CDC2 protein kinase plus cyclin B

MPF is inactive when Threonine 14 & Tyrosine 15 are phosphorylates (by Wee1 and Myt1 kinases)

Plx1 extensively phosphorylates  CDC25 at mitosis, which activates it

Activated CDC25 dephosphorylates Thr14 & Tyr15 (antagonistic to Wee1 & Myt1), which activates CDC2

 

M:

Cyclin levels increase

Increased cyclin partially activates CDK (cyclin dependent kinase), which has bound inhibitors

CDK triggers beginning of mitosis (prophase, metaphase)

Ubiquitin is passed from enzymes E1 to E2 to E3 (bucket brigade)

E2: active throughout cell cycle

E3: temporal specificity; is on mitotic spindle, checks if all chromosomes are on spindle.  If so, ubiquitin tags an

unknown "tether" protein for proteolysis, which causes anaphase to proceed.

Ubiquitin tags cyclin for proteolysis, which inactivates CDK, and allows mitosis to finish


End of Stains chapter